LOCUS       AEC06956.1               701 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana RNA-binding CRS1 / YhbY (CRM) domain-
            containing protein protein.
ACCESSION   CP002685-2124
PROTEIN_ID  AEC06956.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /gene="CAF1"
                     /locus_tag="AT2G20020"
                     /gene_synonym="ATCAF1"
                     /gene_synonym="T2G17.18"
                     /gene_synonym="T2G17_18"
                     /inference="Similar to RNA sequence,
                     EST:INSD:AV810900.1,INSD:EH854256.1,INSD:EL134979.1,
                     INSD:BP663291.1,INSD:EH849634.1,INSD:EL104341.1,
                     INSD:BP789010.1,INSD:EG481140.1,INSD:BP788936.1,
                     INSD:AV811075.1,INSD:BP778859.1,INSD:AV784510.1,
                     INSD:BU635937.1,INSD:BP787941.1,INSD:AV792964.1,
                     INSD:BP780203.1,INSD:EH838639.1,INSD:AV823524.1,
                     INSD:BP788111.1,INSD:BP777391.1,INSD:EG481142.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:BT004337.1,INSD:BX819359.1,INSD:AY045882.1"
                     /note="CAF1; FUNCTIONS IN: RNA binding; INVOLVED IN: Group
                     II intron splicing; LOCATED IN: chloroplast; EXPRESSED IN:
                     22 plant structures; EXPRESSED DURING: 13 growth stages;
                     CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain
                     (InterPro:IPR001890); BEST Arabidopsis thaliana protein
                     match is: RNA-binding CRS1 / YhbY (CRM) domain-containing
                     protein (TAIR:AT1G23400.1); Has 330 Blast hits to 282
                     proteins in 47 species: Archae - 0; Bacteria - 32; Metazoa
                     - 20; Fungi - 4; Plants - 265; Viruses - 0; Other
                     Eukaryotes - 9 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G20020"
                     /db_xref="TAIR:AT2G20020"
     intron_pos      265:1 (1/4)
     intron_pos      308:0 (2/4)
     intron_pos      383:1 (3/4)
     intron_pos      426:0 (4/4)
BEGIN
        1 MSLKLNTPFP IFAPSLFPNH NPRAPSEIRF SRWGNANAER FEQRRRSQEE LEAEIRRDRR
       61 FDAATKIVHT HDSEAAAAEP KTSPFRSRGT PSLPSARSIP GRRSKYSKPD SGPNRPKNKP
      121 RVPDSPPQLD AKPEVKLSED GLTYVINGAP FEFKYSYTET PKVKPLKLRE PAYAPFGPTT
      181 MGRPWTGRAP LPQSQKTPRE FDSFRLPPVG KKGLKPVQKP GPFRPGVGPR YVYSKEEILG
      241 EPLTKEEVRE LVTSCLKTTR QLNMGRDGLT HNMLNNIHDL WKRRRVCKIK CKGVCTVDMD
      301 NVCEQLEEKI GGKVIYRRGG VLFLFRGRNY NHRTRPRFPL MLWKPVAPVY PRLIQQVPEG
      361 LTRQEATNMR RKGRELMPIC KLGKNGVYCD LVKNVKEAFE VCELVRIDCQ GMKGSDFRKI
      421 GAKLKDLVPC VLVSFENEQI LIWRGREWKS SLTTPDKKGD ILEDIEVDTA LPEDDEPSVS
      481 PNQSQTMTQN PPLDSMELQN DPDGHDLSPS TVDSSEMEGT INSLQSWSTK DVTEPTVDSF
      541 LRDLEEPEDE PETSEEISKQ SIERVLILMK QAVESGTALV LDAADLDADT VFSKAVAFSS
      601 VASPGPVFQH GLRKQPTVKK QESQEFGYGD LEAKSSNVVV SRNASKSSNV VVFGKREVAE
      661 RGEREEKEEG SKKKMDEFAE DYREVMPHGT LKVDELAKLL A
//