LOCUS       AEC06725.1               824 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana PHD finger family protein / SWIB
            complex BAF60b domain-containing protein / GYF domain-
            containing protein protein.
ACCESSION   CP002685-1820
PROTEIN_ID  AEC06725.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /locus_tag="AT2G18090"
                     /gene_synonym="T27K22.4"
                     /gene_synonym="T27K22_4"
                     /inference="Similar to RNA sequence,
                     EST:INSD:BE526281.1,INSD:EL098455.1,INSD:EL313263.1,
                     INSD:DR363583.1,INSD:Z30786.1,INSD:EL068240.1,
                     INSD:BP794427.1,INSD:AV546996.1,INSD:AV558008.1,
                     INSD:EL191070.1,INSD:EG528198.1,INSD:BX837036.1,
                     INSD:ES068940.1,INSD:BX834216.1,INSD:EL204718.1,
                     INSD:EG528197.1,INSD:ES047053.1,INSD:CB258010.1,
                     INSD:ES052282.1,INSD:ES150290.1,INSD:EL989080.1,
                     INSD:EL262047.1,INSD:AV529179.1,INSD:ES079778.1,
                     INSD:AV523487.1,INSD:AV441149.2"
                     /inference="similar to RNA sequence, mRNA:INSD:AF370586.1"
                     /note="PHD finger family protein / SWIB complex BAF60b
                     domain-containing protein / GYF domain-containing protein;
                     FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN:
                     regulation of transcription, DNA-dependent; EXPRESSED IN:
                     22 plant structures; EXPRESSED DURING: 13 growth stages;
                     CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type,
                     conserved site (InterPro:IPR019786), SWIB/MDM2 domain
                     (InterPro:IPR003121), Zinc finger, PHD-type
                     (InterPro:IPR001965), Zinc finger, FYVE/PHD-type
                     (InterPro:IPR011011), GYF (InterPro:IPR003169), Zinc
                     finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis
                     thaliana protein match is: DNA binding;zinc ion
                     binding;nucleic acid binding;nucleic acid binding
                     (TAIR:AT3G51120.1); Has 1270 Blast hits to 1121 proteins
                     in 190 species: Archae - 0; Bacteria - 166; Metazoa - 513;
                     Fungi - 60; Plants - 433; Viruses - 0; Other Eukaryotes -
                     98 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G18090"
                     /db_xref="TAIR:AT2G18090"
     intron_pos      97:2 (1/3)
     intron_pos      124:1 (2/3)
     intron_pos      187:0 (3/3)
BEGIN
        1 MPEIDLMRVD HCVSDVKLDD SSSSPPGFFD GGGVPLDSDV KLDEEDSDSL KKRGRRGRPP
       61 RILAKASSPP ISRKRREDED VCFVCFDGGS LVLCDRRGCP KAYHPACVKR TEAFFRSRSK
      121 WNCGWHICTT CQKDSFYMCY TCPYSVCKRC VRSSEYVVVR ENKGFCGICM KTIMLIENAA
      181 EANKEKVQVD FDDQGSWEYL FKIYWVSLKE KLGLSLDDLT KAKNPWKSSS STAAKRRTTS
      241 RVHEKDDGNS PGVMKIRRAK VRKMDAVSVS NLGPSLDSNC SLGDRLPQLT SAATWATNEL
      301 LDFVGYMKNG DISVLSKYDV QTLVLEYVRR NNLQNSPQNS EIMCDSKLMR LFGKERVDNL
      361 EMLKLLDSHF IDQVRSPVTD NSAGGVTETM SYQVNAGRSC DRLNTSEQHQ EGESQQLNGH
      421 SIQVRPSSSD SRNHAVVKPD TSATLSNKPI DGLDTNMVWL YGDPDGKIHG PFSLYNLRQW
      481 NSSGHFPPEL RIWRLGEQQH SSILLTDALN GQFHKTGLLQ NHSIPKQEVT ATIANDQNRS
      541 VAVPKIESRI LDFSPNSVCT DQSVISSSNS VITRSSDVSN KSGNNCSHAV PLDFSLSNER
      601 DTVGFISLWD KRKVESSLLV QSPISCSLSL ATLPRNSNCS LPPHERWSAG QTDGNSAATT
      661 ACNQNGSLSG SAEKQVTATV QSCGQNWNAA TPSSASNVWD SNSGLTSFPD NQEIDFLDLF
      721 SPTFKFNFAS TTTDWQPIVA GPDECDESVS DLLAEVEAME SQKRLPSPTS TFRGPEELLI
      781 RHSINDSFSP AEGHSPALDV SKGDSMSSTN DLQMHSRSNS TVHF
//