LOCUS AEC06587.1 350 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana lysm domain GPI-anchored protein 2 precursor protein. ACCESSION CP002685-1645 PROTEIN_ID AEC06587.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 19698289) AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D., Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V., Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L., Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L., Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H., Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D., Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and Venter,J.C. TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 761-768 (1999) PUBMED 10617197 REFERENCE 2 (bases 1 to 19698289) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 19698289) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="2" /ecotype="Columbia" protein /gene="LYM2" /locus_tag="AT2G17120" /gene_synonym="CEBiP-like 1" /gene_synonym="CL-1" /gene_synonym="F6P23.25" /gene_synonym="F6P23_25" /gene_synonym="LYP1" /gene_synonym="lysm domain GPI-anchored protein 2 precursor" /gene_synonym="lysM domain GPI-anchored protein 2 precursor" /gene_synonym="LysM-containing receptor protein 1" /inference="Similar to RNA sequence, EST:INSD:BP577922.1,INSD:DR315516.1,INSD:ES151557.1, INSD:DR315508.1,INSD:EH904388.1,INSD:DR304699.1, INSD:BP595038.1,INSD:EH925976.1,INSD:AV563875.1, INSD:DR315501.1,INSD:EH895170.1,INSD:EH809810.1, INSD:CF773054.1,INSD:EL197379.1,INSD:DR315514.1, INSD:DR315503.1,INSD:DR315504.1,INSD:DR315497.1, INSD:DR315513.1,INSD:CF774420.1,INSD:EL042336.1, INSD:BP640128.1,INSD:EH860765.1,INSD:DR315498.1, INSD:AV539144.1,INSD:EL014114.1,INSD:EG480843.1, INSD:AV522095.1,INSD:AV537598.1,INSD:AV540629.1, INSD:BP782627.1,INSD:EL115348.1,INSD:AV559594.1, INSD:EH827658.1,INSD:CF774012.1,INSD:DR315510.1, INSD:DR315506.1,INSD:EG499666.1,INSD:DR370301.1, INSD:BP561006.2,INSD:ES110791.1,INSD:EL970076.1, INSD:BP607992.1,INSD:ES159157.1,INSD:EL220388.1, INSD:BP635236.1,INSD:ES207681.1,INSD:DR315505.1, INSD:BP862894.1,INSD:AV543269.1,INSD:EL254030.1, INSD:AV551541.1,INSD:N65517.1,INSD:AI994958.1, INSD:BE524221.1,INSD:DR315512.1,INSD:BP613862.1, INSD:AU227051.1,INSD:EL134176.1,INSD:BP578953.1, INSD:DR315507.1,INSD:AV784334.1,INSD:DR315509.1, INSD:DR315499.1,INSD:EG480841.1,INSD:AV823563.1, INSD:EL284669.1,INSD:EH989082.1,INSD:DR315515.1, INSD:EH965003.1,INSD:BP605166.1,INSD:DR315502.1, INSD:AV549577.1,INSD:DR370967.1,INSD:DR315496.1, INSD:AV526192.1,INSD:H36005.1,INSD:EG520456.1, INSD:BP634080.1,INSD:AI994228.1,INSD:EH898801.1, INSD:DR315511.1,INSD:DR315500.1,INSD:ES156429.1, INSD:AA651149.1,INSD:ES164371.1,INSD:EG527104.1, INSD:AV550806.1,INSD:AV830612.1,INSD:ES016765.1, INSD:DR315517.1,INSD:AV784559.1,INSD:BP577200.1, INSD:AV526307.1" /inference="similar to RNA sequence, mRNA:INSD:AF428464.1,INSD:AY056221.1,INSD:AY125560.1, INSD:BX819139.1,INSD:AY088373.1" /note="lysm domain GPI-anchored protein 2 precursor (LYM2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell wall macromolecule catabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Peptidoglycan-binding Lysin subgroup (InterPro:IPR002482); BEST Arabidopsis thaliana protein match is: lysm domain GPI-anchored protein 1 precursor (TAIR:AT1G21880.2); Has 636 Blast hits to 591 proteins in 145 species: Archae - 0; Bacteria - 285; Metazoa - 0; Fungi - 0; Plants - 336; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink)." /db_xref="Araport:AT2G17120" /db_xref="TAIR:AT2G17120" intron_pos 220:1 (1/3) intron_pos 260:2 (2/3) intron_pos 318:1 (3/3) BEGIN 1 METSCFTLLG LLVSLSFFLT LSAQMTGNFN CSGSTSTCQS LVGYSSKNAT TLRNIQTLFA 61 VKNLRSILGA NNLPLNTSRD QRVNPNQVVR VPIHCSCSNG TGVSNRDIEY TIKKDDILSF 121 VATEIFGGLV TYEKISEVNK IPDPNKIEIG QKFWIPLPCS CDKLNGEDVV HYAHVVKLGS 181 SLGEIAAQFG TDNTTLAQLN GIIGDSQLLA DKPLDVPLKA CSSSVRKDSL DAPLLLSNNS 241 YVFTANNCVK CTCDALKNWT LSCQSSSEIK PSNWQTCPPF SQCDGALLNA SCRQPRDCVY 301 AGYSNQTIFT TASPACPDSA GPDNYASTLS SSFNFVIVLI QCALLCLCLL //