LOCUS AEC06562.1 891 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana transportin 1 protein. ACCESSION CP002685-1593 PROTEIN_ID AEC06562.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 19698289) AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D., Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V., Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L., Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L., Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H., Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D., Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and Venter,J.C. TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 761-768 (1999) PUBMED 10617197 REFERENCE 2 (bases 1 to 19698289) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 19698289) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="2" /ecotype="Columbia" protein /gene="TRN1" /locus_tag="AT2G16950" /gene_synonym="ATTRN1" /gene_synonym="F12A24.13" /gene_synonym="F12A24_13" /gene_synonym="transportin 1" /gene_synonym="TRANSPORTIN 1" /inference="Similar to RNA sequence, EST:INSD:BP811570.1,INSD:EH879800.1,INSD:BP621436.1, INSD:BP607201.1,INSD:EL994555.1,INSD:BX837754.1, INSD:BX837758.1,INSD:AV819005.1,INSD:ES018740.1, INSD:AV547923.1,INSD:EL311145.1,INSD:BP609135.1, INSD:AV825868.1,INSD:DR354896.1,INSD:AV517949.1, INSD:AV792727.1,INSD:BX834641.1,INSD:AV550911.1, INSD:EH984867.1,INSD:AV566559.1,INSD:EG496777.1, INSD:DR363856.1,INSD:EH839664.1,INSD:AV540284.1, INSD:AV804212.1,INSD:EL239875.1,INSD:EL979236.1, INSD:AV806235.1,INSD:BP791541.1,INSD:EL196171.1, INSD:EH915790.1,INSD:ES088633.1,INSD:EL987673.1, INSD:AV524485.1,INSD:ES092692.1,INSD:ES001898.1" /inference="similar to RNA sequence, mRNA:INSD:BT008804.1,INSD:BT002041.1" /note="transportin 1 (TRN1); CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G16960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink)." /db_xref="Araport:AT2G16950" /db_xref="TAIR:AT2G16950" intron_pos 63:0 (1/28) intron_pos 159:0 (2/28) intron_pos 189:0 (3/28) intron_pos 215:0 (4/28) intron_pos 242:0 (5/28) intron_pos 259:0 (6/28) intron_pos 287:2 (7/28) intron_pos 310:0 (8/28) intron_pos 329:0 (9/28) intron_pos 339:0 (10/28) intron_pos 359:0 (11/28) intron_pos 397:0 (12/28) intron_pos 435:0 (13/28) intron_pos 468:0 (14/28) intron_pos 510:0 (15/28) intron_pos 535:0 (16/28) intron_pos 559:0 (17/28) intron_pos 596:0 (18/28) intron_pos 624:0 (19/28) intron_pos 660:0 (20/28) intron_pos 694:0 (21/28) intron_pos 715:0 (22/28) intron_pos 740:0 (23/28) intron_pos 764:0 (24/28) intron_pos 805:2 (25/28) intron_pos 823:0 (26/28) intron_pos 846:0 (27/28) intron_pos 866:0 (28/28) BEGIN 1 MAATAVVWQP RDDGLAEICS LLEQQISPSS VVDKSQIWKQ LQHFSQFPDF NNYLVFILVR 61 AEGKSVEVRQ AAGLLLKNNL RGAYPSMTQE NQKYIKSELL PCLGAADRNI RTTVGTIISV 121 IVNIEGVSGW HELLPALVTC LDSNDLNHMD GAMDALSKIC EDIPHVLDTE VPGLAERPIN 181 IFLPRLLQFF QSPHASLRKL ALGSVNQYII IMPAALYNSL DKYLQGLFVL ANDPVPEVRK 241 LVCAAFVHLT EVLPSSIEPH LRNVMEYMLQ VNRDPDEEVS LEACEFWSAY CDAQLPPENL 301 KEFLPRLIPV LLENMAYADD DESLLDAEED ESQPDRDQDL KPRFHTSRLH GSEDFDDDDD 361 DSFNVWNLRK CSAAAIDVLS NVFGDEILPA LMPLIQKNLS ASGDEAWKQR EAAVLALGAI 421 AEGCMNGLYP HLSEIVAFLL PLLDDKFPLI RSISCWTLSR FGKYLIQESG NPKGYEQFEK 481 VLMGLLRRLL DTNKRVQEAA CSAFATVEED AAEELVPHLG VILQHLMCAF GKYQRRNLRI 541 VYDAIGTLAD SVREELNKPA YLEILMPPLV AKWQQLSNSD KDLFPLLECF TSISQALGVG 601 FAPFAQPVFQ RCMDIIQLQQ LAKVNPASAG AQYDREFIVC SLDLLSGLAE GLGSGIESLV 661 QQSNLRDLLL NCCIDEAADV RQSAFALMGD LARVFPVYLQ PRLLDFLEIA SQQLSANLNR 721 ENLSVANNAC WAIGELAVKV RQEVSPIVAK VVSSLGLILQ HGEGVNKALV ENSAITLGRL 781 AWIRPDLVAP HMDHFMKPWC MALSMVRDDI EKEDAFRGLC AVVKVNPSGG VSSLVFICQA 841 IASWHEIRSE DVQTEVSQVL NGYKHMLGNS WAECLSALDP PVKERLARYQ V //