LOCUS       AEC06559.1               599 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana Splicing factor, CC1-like protein protein.
ACCESSION   CP002685-1588
PROTEIN_ID  AEC06559.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /locus_tag="AT2G16940"
                     /gene_synonym="F12A24.12"
                     /gene_synonym="F12A24_12"
                     /note="Splicing factor, CC1-like; FUNCTIONS IN: RNA
                     binding, nucleotide binding, nucleic acid binding;
                     INVOLVED IN: mRNA processing; LOCATED IN: nucleus;
                     EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
                     growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition
                     motif, RNP-1 (InterPro:IPR000504), Splicing factor,
                     CC1-like (InterPro:IPR006509), Nucleotide-binding,
                     alpha-beta plait (InterPro:IPR012677), RNA recognition,
                     domain 1 (InterPro:IPR003954); BEST Arabidopsis thaliana
                     protein match is: Splicing factor, CC1-like
                     (TAIR:AT5G09880.1)."
                     /db_xref="Araport:AT2G16940"
                     /db_xref="TAIR:AT2G16940"
     intron_pos      161:2 (1/14)
     intron_pos      181:1 (2/14)
     intron_pos      190:2 (3/14)
     intron_pos      218:0 (4/14)
     intron_pos      246:0 (5/14)
     intron_pos      264:2 (6/14)
     intron_pos      342:0 (7/14)
     intron_pos      370:0 (8/14)
     intron_pos      395:0 (9/14)
     intron_pos      425:0 (10/14)
     intron_pos      446:2 (11/14)
     intron_pos      517:0 (12/14)
     intron_pos      546:2 (13/14)
     intron_pos      585:0 (14/14)
BEGIN
        1 MDFDEYEYLE KTVENPHLEN EVGNGGGDEK VKSEGKERSR SSRHRGDKKK ERDEDEDGRR
       61 SKRSRSHHRS RSRDRERDRH RSSREHRDRD REKDVDKEER NGKDRERDRD KDRDSKGRDH
      121 EKDRSRRSRS RSERHRSQER EKSLEIEPKE RETKDRDRDR RFILMLLGPL VLPSVQLDGA
      181 LPCRDFSCFI RHKDKKEDKV EPEADPERDQ RTVFAYQIAL RATERDVYEF FSRAGKVCPF
      241 LCRFHVRDVR IIMDRISRRS RGIGYVEFYD TMSVPMAIAL SGQPLLGQPV MVKPSEAEKN
      301 LVQSTTAAAG AGGMLGPYSG GARRLYVGNL HINMSEDDLR KVFESFGSVE LVQVPRDETG
      361 LCKGFGFVQF ARLEDARNAL NLNGQLEIAG RAIKVSAVTD QTEVPEAGQT QTTGDLDDDD
      421 GGGLSLNAQS RALLMQKLDR SGTASSTGLT TAASFNGGVS TISSLAAPAL VQGSFPAVAG
      481 LAGSGIIPGV IPAGFDPIGV PSECLLLKNM FDPSTETEDD FDEDIKEDVK EECSKFGKLN
      541 HIFVDKNSVG FVYLRFENAQ AAIGAQRALH GRWFAGKMIT ATYMTTEAYE AKFPESKVV
//