LOCUS       AEC06028.1               995 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana RNA helicase, ATP-dependent, SK12/
            DOB1 protein protein.
ACCESSION   CP002685-896
PROTEIN_ID  AEC06028.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /gene="HEN2"
                     /locus_tag="AT2G06990"
                     /gene_synonym="hua enhancer 2"
                     /gene_synonym="T4E14.10"
                     /gene_synonym="T4E14_10"
                     /inference="Similar to RNA sequence,
                     EST:INSD:ES106296.1,INSD:ES086122.1,INSD:ES068137.1,
                     INSD:AA395356.1,INSD:ES009902.1,INSD:AV823480.1,
                     INSD:EL039913.1,INSD:AV784456.1,INSD:T43701.1,
                     INSD:AI994891.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:AY050658.1,INSD:AY080791.1,INSD:BT005794.1"
                     /note="hua enhancer 2 (HEN2); CONTAINS InterPro DOMAIN/s:
                     DNA/RNA helicase, DEAD/DEAH box type, N-terminal
                     (InterPro:IPR011545), DSH, C-terminal
                     (InterPro:IPR012961), DEAD-like helicase, N-terminal
                     (InterPro:IPR014001), DNA/RNA helicase, C-terminal
                     (InterPro:IPR001650), RNA helicase, ATP-dependent,
                     SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2,
                     ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis
                     thaliana protein match is: RNA helicase, ATP-dependent,
                     SK12/DOB1 protein (TAIR:AT1G59760.1); Has 9841 Blast hits
                     to 8173 proteins in 1240 species: Archae - 753; Bacteria -
                     3176; Metazoa - 1197; Fungi - 1159; Plants - 489; Viruses
                     - 32; Other Eukaryotes - 3035 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G06990"
                     /db_xref="TAIR:AT2G06990"
     intron_pos      330:0 (1/15)
     intron_pos      435:0 (2/15)
     intron_pos      470:0 (3/15)
     intron_pos      493:0 (4/15)
     intron_pos      549:0 (5/15)
     intron_pos      573:0 (6/15)
     intron_pos      612:0 (7/15)
     intron_pos      682:0 (8/15)
     intron_pos      735:0 (9/15)
     intron_pos      765:0 (10/15)
     intron_pos      796:0 (11/15)
     intron_pos      847:1 (12/15)
     intron_pos      897:0 (13/15)
     intron_pos      929:0 (14/15)
     intron_pos      960:0 (15/15)
BEGIN
        1 MSAQMEEPET LGKRKESESS KLRSDETPTP EPRTKRRSLK RACVHEVAVP NDYTPTKEET
       61 IHGTLDNPVF NGDMAKTYPF KLDPFQSVSV ACLERKESIL VSAHTSAGKT AVAEYAIAMA
      121 FRDKQRVIYT SPLKALSNQK YRELQHEFKD VGLMTGDVTL SPNASCLVMT TEILRAMLYR
      181 GSEVLKEVAW VIFDEIHYMK DRERGVVWEE SIIFLPPAIK MVFLSATMSN ATEFAEWICY
      241 LHKQPCHVVY TDFRPTPLQH YAFPMGGGGL YLVVDDNEQF REDSFVKMQD TFPKPKSNDG
      301 KKSANGKSGG RGAKGGGGPG DSDVYKIVKM IMERKFEPVI IFSFSRRECE QHALSMSKLD
      361 FNTDEEKEVV EQVFNNAMQC LNEEDRSLPA IELMLPLLQR GIAVHHSGLL PVIKELVELL
      421 FQEGLVKALF ATETFAMGLN MPAKTVVFTA VKKWDGDSHR YIGSGEYIQM SGRAGRRGKD
      481 ERGICIIMID EQMEMNTLRD MMLGKPAPLL STFRLSYYTI LNLLSRAEGQ FTAEHVIRHS
      541 FHQFQHEKAL PDIGNKVSKL EEEAAILNAS GEAEVAEYHN LQFDIAKHEK KLMSEIIRPE
      601 RVLCFLDTGR LVKIREGGTD WGWGVVVNVV KNSSVGTGSA SSHGGGYIVD TLLHCSTGFS
      661 ENGAKPKPCP PRAGEKGEMH VVPVQLPLIS ALSRLRISVP SDLRPVEARQ SILLALQELS
      721 SRFPLGFPKL HPVKDMNIQD TEIVDLVSQI EEVEQKLLAH PMHKSEDDQQ IKSFQRKAEV
      781 NYEIQQLKSK MRDSQLQKFR DELKNRSRVL KKLGHIDADG VVQVKGRAAC LIDTGDELLV
      841 TELMFNGTFN DLDHHQVAAL ASCFIPVDKS NEQVNLRNEL TKPLQQLQDS ARKIAEIQHE
      901 CKLEIDVEEY VESTIRPFLM DVIYSWSKGA SFAEIIQMTD IFEGSIIRSA RRLDEFLNQL
      961 RAAAEAVGES SLESKFAAAS ESLRRGIMFA NSLYL
//