LOCUS       AEC05899.1               536 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana CCCH-type zinc fingerfamily protein
            with RNA-binding domain-containing protein protein.
ACCESSION   CP002685-733
PROTEIN_ID  AEC05899.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /locus_tag="AT2G05160"
                     /gene_synonym="F5G3.6"
                     /gene_synonym="F5G3_6"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EG443547.1,INSD:EG443559.1,INSD:EG443556.1,
                     INSD:EG443544.1,INSD:EG443558.1,INSD:EG443546.1,
                     INSD:EG443549.1,INSD:EL216995.1,INSD:EG443545.1,
                     INSD:EG443548.1,INSD:DR354934.1,INSD:EG443557.1,
                     INSD:EG443551.1,INSD:EG443561.1,INSD:EG443555.1,
                     INSD:EG443560.1,INSD:EG443563.1,INSD:EG443550.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:AY429380.1,INSD:AY429381.1"
                     /note="CCCH-type zinc fingerfamily protein with
                     RNA-binding domain; FUNCTIONS IN: RNA binding, nucleotide
                     binding, zinc ion binding, nucleic acid binding; INVOLVED
                     IN: biological_process unknown; LOCATED IN:
                     cellular_component unknown; EXPRESSED IN: 6 plant
                     structures; EXPRESSED DURING: 4 anthesis, petal
                     differentiation and expansion stage; CONTAINS InterPro
                     DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA
                     recognition motif, RNP-1 (InterPro:IPR000504),
                     Nucleotide-binding, alpha-beta plait (InterPro:IPR012677);
                     BEST Arabidopsis thaliana protein match is: Zinc finger
                     (CCCH-type) family protein / RNA recognition motif
                     (RRM)-containing protein (TAIR:AT3G52980.1); Has 286 Blast
                     hits to 218 proteins in 21 species: Archae - 0; Bacteria -
                     0; Metazoa - 6; Fungi - 0; Plants - 277; Viruses - 0;
                     Other Eukaryotes - 3 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G05160"
                     /db_xref="TAIR:AT2G05160"
     intron_pos      283:2 (1/4)
     intron_pos      425:1 (2/4)
     intron_pos      471:1 (3/4)
     intron_pos      505:2 (4/4)
BEGIN
        1 MNFTESMNVV HARIQQLEPE NAAKIFGYLL LMQENGNRDM IRLAFCPDSV MCSVINCVKY
       61 ELARNSHHYH SPPSDHIPTP KFGSFTGSSP LSVSVSPPMK TGFWENSTEM DTLQNNLQFL
      121 NFEDPLTSPE FSNGFFSQER QCLPLRTSRR SPSLPEFPVK ICHYFNKGFC KHGNNCRYFH
      181 GQIIPERESF AQMFNPNNNL SDEEHVVSPV SLEKLEGEII ELLKLRRGAP ISIASLPMMY
      241 YEKYGRTLQA EGYLTESQRH GKAGYSLTKL LARLKNTIRL VDRPHGQHSV ILAEDASKFV
      301 EYTGERNEHG AILAGSRQIY LTFPAESSFT EHDVSIYFTS YGHVEDVRIP CQQKRMYGFV
      361 TFASSETVKH ILAKGNPHFI CNARVLVKPY REKSRSSRYL DNYKPLHGMR YGSKFIERDI
      421 EMNTLPPRVS ESSRMRKPFL SEPEQSVSKS LPTNYSYLGF SSDDFKLTSN AEQEEQAERL
      481 SYLLDYLNTE DNVMNITTNY RDNDRRTHCE SLDSQVLNLP ESPFSSLSGK EISTVT
//