LOCUS       AEC05629.1               455 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana myb domain protein 88 protein.
ACCESSION   CP002685-349
PROTEIN_ID  AEC05629.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /gene="MYB88"
                     /locus_tag="AT2G02820"
                     /gene_synonym="AtMYB88"
                     /gene_synonym="myb domain protein 88"
                     /gene_synonym="T20F6.4"
                     /gene_synonym="T20F6_4"
                     /inference="Similar to RNA sequence,
                     EST:INSD:ES071688.1,INSD:EL337626.1,INSD:EL298385.1,
                     INSD:EH902724.1,INSD:EH956227.1,INSD:DN604634.1,
                     INSD:EL327979.1,INSD:EL050791.1,INSD:EL231206.1,
                     INSD:EL264260.1,INSD:EH878167.1,INSD:EL028396.1"
                     /note="myb domain protein 88 (MYB88); CONTAINS InterPro
                     DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb,
                     DNA-binding (InterPro:IPR014778), Homeodomain-like
                     (InterPro:IPR009057), Homeodomain-related
                     (InterPro:IPR012287), HTH transcriptional regulator,
                     Myb-type, DNA-binding (InterPro:IPR017930), Myb
                     transcription factor (InterPro:IPR015495); BEST
                     Arabidopsis thaliana protein match is: Duplicated
                     homeodomain-like superfamily protein (TAIR:AT1G14350.2);
                     Has 8359 Blast hits to 7654 proteins in 549 species:
                     Archae - 0; Bacteria - 2; Metazoa - 785; Fungi - 539;
                     Plants - 5060; Viruses - 3; Other Eukaryotes - 1970
                     (source: NCBI BLink)."
                     /db_xref="Araport:AT2G02820"
                     /db_xref="TAIR:AT2G02820"
     intron_pos      37:0 (1/9)
     intron_pos      52:2 (2/9)
     intron_pos      71:2 (3/9)
     intron_pos      96:0 (4/9)
     intron_pos      114:2 (5/9)
     intron_pos      176:2 (6/9)
     intron_pos      236:1 (7/9)
     intron_pos      285:0 (8/9)
     intron_pos      332:2 (9/9)
BEGIN
        1 MEETTKQNNM KKKKKILLHS DDSKKKERHI VTWSPEEDDI LRKQISLQGT ENWAIIASKF
       61 NDKSTRQCRR RWYTYLNSDF KRGGWSPEED TLLCEAQRLF GNRWTEIAKV VSGRTDNAVK
      121 NRFTTLCKKR AKHEAMAKEN RIACCVNSDN KRLLFPDGIS TPLKAESESP LTKKMRRSHI
      181 PNLTEIKSYG DRSHIKVEST MNQQRRHPFS VVAHNATSSD GTEEQKQIGN VKESDGEDKS
      241 NQEVFLKKDD SKVTALMQQA ELLSSLAQKV NADNTDQSME NAWKVLQDFL NKSKENDLFR
      301 YGIPDIDFQL DEFKDLVEDL RSSNEDSQSS WRQPDLHDSP ASSEYSSGSG SGSTIMTHPS
      361 GDKTQQLMSD TQTTSHQQNG GELLQDNGIV SDATVEQVGL LSTGHDVLKN SNETVPIPGE
      421 EEFNSPVQVT PLFRSLAAGI PSPQFSESVS IHLTN
//