LOCUS       ABE00165.1              1174 aa    PRT              BCT 31-JAN-2014
DEFINITION  Ligilactobacillus salivarius UCC118 Transcription-repair
            coupling factor protein.
ACCESSION   CP000233-1342
PROTEIN_ID  ABE00165.1
SOURCE      Ligilactobacillus salivarius UCC118
  ORGANISM  Ligilactobacillus salivarius UCC118
            Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
            Ligilactobacillus.
REFERENCE   1  (bases 1 to 1827111)
  AUTHORS   Claesson,M.J., Li,Y., Leahy,S., Canchaya,C., van Pijkeren,J.P.,
            Cerdeno-Tarraga,A.M., Parkhill,J., Flynn,S., O'Sullivan,G.C.,
            Collins,J.K., Higgins,D., Shanahan,F., Fitzgerald,G.F., van
            Sinderen,D. and O'Toole,P.W.
  TITLE     Multireplicon genome architecture of Lactobacillus salivarius
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 103 (17), 6718-6723 (2006)
   PUBMED   16617113
REFERENCE   2  (bases 1 to 1827111)
  AUTHORS   Claesson,M.J., Li,Y., Leahy,S., Canchaya,C., van Pijkeren,J.P.,
            Cerdeno-Tarraga,A.M., Parkhill,J., Flynn,S., O'Sullivan,G.C.,
            Collins,J.K., Higgins,D.G., Shanahan,F., Fitzgerald,G.F., van
            Sinderen,D. and O'Toole,P.W.
  CONSRTM   Alimentary Pharmabiotic Centre, University College Cork
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2005) Department of Microbiology, Alimentary
            Pharmabiotic Centre, University College Cork, College Road, Cork,
            Ireland
FEATURES             Qualifiers
     source          1237087..1734885,1744903..1827111)
                     /organism="Ligilactobacillus salivarius UCC118"
                     /mol_type="genomic DNA"
                     /strain="UCC118"
                     /db_xref="taxon:362948"
                     /focus
     source          /organism="Lactobacillus phage Sal2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:364251"
     source          /organism="Lactobacillus phage Sal1"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:364252"
     source          /organism="Lactobacillus phage Sal4"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:364253"
     source          /organism="Lactobacillus phage Sal3"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:364254"
     protein         /gene="mfd"
                     /locus_tag="LSL_1360"
                     /note="COG1197 [LK] Transcription-repair coupling factor
                     (superfamily II helicase)"
                     /transl_table=11
BEGIN
        1 MELIDTFLNV SELKEWKKNL TTDGRHMLTG LVGSSKTLMI AKLLKDKKVP QLIVESDLYH
       61 AQQLQSDLEN IIEDTRIELF PVEDMLVAEM ATSSPEYRAQ RVSALTALTS ENPVIVITTV
      121 AGIRRFLPSV EYWKQHEIQL EIGKEVDPAE LEKKLFEMGY IRSNMVNAPG DFAIRGSIVD
      181 IFPLDADNPY RIDFFDIEID SMRTFDIANQ RSIENVDQVT IIPATDFIAS KEVLELASER
      241 IKKEYNKQFS KLKNIKEEKL TENIQKMLAD FKDGFLKAEY LPYAEYIYPQ STNLIDYLSD
      301 EGLVIFDDYS RLTEKQKNLE YSEADWVTDK LRTNSLFDNL KLGHDFRSVE KKIKQPRIFL
      361 SLFQKGLGRM KFAQLVDIKT RAVQKFFGQM PLLKTEVSRW EKQKQTVVFL INDRERLEKV
      421 SQTLDDFEIK SIITDKNAIQ VGVTQVVQGF LNEGFEIPKD KLVVLTENEL FSNVKKKQPR
      481 RLTMNNAERL KSYTELKKGD YVVHVNHGIG RYMGMQTLEV GGHHHDYMTI LYQDDAKLFI
      541 PVSQLDKIQK YVSSESKTPR VNKLGGSEWA KTKRRVANKI EDIADELVDL YAKREAEKGY
      601 AFTPDDSYQK EFEDAFPYTE TPDQLRSAKE IKQDMEKTKP MDRLLIGDVG YGKTEVALRA
      661 AFKAVQDGKQ VAFLAPTTVL AQQHYETMEQ RFENFPVEIG ILSRFNTAKE IKETIENLET
      721 GKLDIVVGTH RLLSKDVKFA DLGLLIIDEE QRFGVKHKER LKELKTSVDV LTLTATPIPR
      781 TLNMSMLGVR DLSVIETAPM NRYPIQTYVI EKNYGVIVDG IKREIERGGQ VFYLHNRVDD
      841 IEKVASELES LVPEAKVAYI HGRMTETQLE NILIDFIDGE YDVLVTTTII ETGVDIPNVN
      901 TLFVDNADRM GLSQLYQLRG RVGRSNRIAY AYFMYQPNKV LTEVAEKRLE AIKDFTELGS
      961 GFKIAMRDLS IRGAGNLLGK QQHGFIDSVG YDLYTQMLND AVAKKRGKEI KVKTDAELNL
     1021 DLEAYLPADY ITDPKQKVEI YKRIHQFENE DQYIEVQDDL IDRFGEYPIE VHNLLEVGLL
     1081 KMYADAALVD SVSQNKKTIE IELSDKLNGK LDIKDVFKVL SVTKFSTTLG NKNQKIQIKL
     1141 NIQPGMESNQ ILEELKKLLK ELAKMVDVTM DKSA
//