LOCUS BC068474 2550 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens heat shock protein 90kDa alpha (cytosolic), class B
member 1, mRNA (cDNA clone MGC:87106 IMAGE:4824686), complete cds.
ACCESSION BC068474
VERSION BC068474.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2550)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2550)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: f Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20149593.
FEATURES Location/Qualifiers
source 1..2550
/db_xref="H-InvDB:HIT000263031"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87106 IMAGE:4824686"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2550
/gene="HSP90AB1"
/gene_synonym="D6S182"
/gene_synonym="HSP90-BETA"
/gene_synonym="HSP90B"
/db_xref="GeneID:3326"
/db_xref="HGNC:HGNC:5258"
/db_xref="MIM:140572"
CDS 103..2277
/gene="HSP90AB1"
/gene_synonym="D6S182"
/gene_synonym="HSP90-BETA"
/gene_synonym="HSP90B"
/codon_start=1
/product="heat shock protein 90kDa alpha (cytosolic),
class B member 1"
/protein_id="AAH68474.1"
/db_xref="GeneID:3326"
/db_xref="HGNC:HGNC:5258"
/db_xref="MIM:140572"
/translation="MPEEVHHGEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELI
SNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGMTKADLINNL
GTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESS
AGGSFTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLE
KEREKEISDDEAEEEKGEKEEEDKDDEEKPKIEDVGSDEEDDSGKDKKKKTKKIKEKY
IDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF
IPRRAPFDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISR
EMLQQSKILKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRR
LSELLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGF
EVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKL
MKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKK
HLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYR
MIKLGLGIDEDEVAAEEPNAAVPDEIPPLEGDEDASRMEEVD"
BASE COUNT 724 a 550 c 655 g 621 t
ORIGIN
1 ggtagctctc tcgagtcact ccggcgcagt gttgggactg tctgggtatc ggaaagcaag
61 cctacgttgc tcactattac gtataatcct tttcttttca agatgcctga ggaagtgcac
121 catggagagg aggaggtgga gacttttgcc tttcaggcag aaattgccca actcatgtcc
181 ctcatcatca ataccttcta ttccaacaag gagattttcc ttcgggagtt gatctctaat
241 gcttctgatg ccttggacaa gattcgctat gagagcctga cagacccttc gaagttggac
301 agtggtaaag agctgaaaat tgacatcatc cccaaccctc aggaacgtac cctgactttg
361 gtagacacag gcattggcat gaccaaagct gatctcataa ataatttggg aaccattgcc
421 aagtctggta ctaaagcatt catggaggct cttcaggctg gtgcagacat ctccatgatt
481 gggcagtttg gtgttggctt ttattctgcc tacttggtgg cagagaaagt ggttgtgatc
541 acaaagcaca acgatgatga acagtatgct tgggagtctt ctgctggagg ttccttcact
601 gtgcgtgctg accatggtga gcccattggc aggggtacca aagtgatcct ccatcttaaa
661 gaagatcaga cagagtacct agaagagagg cgggtcaaag aagtagtgaa gaagcattct
721 cagttcatag gctatcccat caccctttat ttggagaagg aacgagagaa ggaaattagt
781 gatgatgagg cagaggaaga gaaaggtgag aaagaagagg aagataaaga tgatgaagaa
841 aagcccaaga tcgaagatgt gggttcagat gaggaggatg acagcggtaa ggataagaag
901 aagaaaacta agaagatcaa agagaaatac attgatcagg aagaactaaa caagaccaag
961 cctatttgga ccagaaaccc tgatgacatc acccaagagg agtatggaga attctacaag
1021 agcctcacta atgactggga agaccacttg gcagtcaagc acttttctgt agaaggtcag
1081 ttggaattca gggcattgct atttattcct cgtcgggctc cctttgacct ttttgagaac
1141 aagaagaaaa agaacaacat caaactctat gtccgccgtg tgttcatcat ggacagctgt
1201 gatgagttga taccagagta tctcaatttt atccgtggtg tggttgactc tgaggatctg
1261 cccctgaaca tctcccgaga aatgctccag cagagcaaaa tcttgaaagt cattcgcaaa
1321 aacattgtta agaagtgcct tgagctcttc tctgagctgg cagaagacaa ggagaattac
1381 aagaaattct atgaggcatt ctctaaaaat ctcaagcttg gaatccacga agactccact
1441 aaccgccgcc gcctgtctga gctgctgcgc tatcatacct cccagtctgg agatgagatg
1501 acatctctgt cagagtatgt ttctcgcatg aaggagacac agaagtccat ctattacatc
1561 actggtgaga gcaaagagca ggtggccaac tcagcttttg tggagcgagt gcggaaacgg
1621 ggcttcgagg tggtatatat gaccgagccc attgacgagt actgtgtgca gcagctcaag
1681 gaatttgatg ggaagagcct ggtctcagtt accaaggagg gtctggagct gcctgaggat
1741 gaggaggaga agaagaagat ggaagagagc aaggcaaagt ttgagaacct ctgcaagctc
1801 atgaaagaaa tcttagataa gaaggttgag aaggtgacaa tctccaatag acttgtgtct
1861 tcaccttgct gcattgtgac cagcacctac ggctggacag ccaatatgga gcggatcatg
1921 aaagcccagg cacttcggga caactccacc atgggctata tgatggccaa aaagcacctg
1981 gagatcaacc ctgaccaccc cattgtggag acgctgcggc agaaggctga ggccgacaag
2041 aatgataagg cagttaagga cctggtggtg ctgctgtttg aaaccgccct gctatcttct
2101 ggcttttccc ttgaggatcc ccagacccac tccaaccgca tctatcgcat gatcaagcta
2161 ggtctaggta ttgatgaaga tgaagtggca gcagaggaac ccaatgctgc agttcctgat
2221 gagatccccc ctctcgaggg cgatgaggat gcgtctcgca tggaagaagt cgattaggtt
2281 aggagttcat agttggaaaa cttgtgccct tgtatagtgt ccccatgggc tcccactgca
2341 gcctcgagtg cccctgtccc acctggctcc ccctgctggt gtctagtgtt tttttccctc
2401 tcctgtcctt gtgttgaagg cagtaaacta agggtgtcaa gccccattcc ctctctactc
2461 ttgacagcag gattggatgt tgtgtattgt ggtttatttt attttcttca ttttgttctg
2521 aaattaaagt atgcaaaaaa aaaaaaaaaa
//