LOCUS BC068030 2002 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens ciliary neurotrophic factor, mRNA (cDNA clone MGC:75418 IMAGE:30407481), complete cds. ACCESSION BC068030 VERSION BC068030.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2002) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2002) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (24-MAR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Michael Brownstein cDNA Library Preparation: Invitrogen Corp cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 141 Row: p Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 25952136. FEATURES Location/Qualifiers source 1..2002 /db_xref="H-InvDB:HIT000262897" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:75418 IMAGE:30407481" /tissue_type="White Matter pool- 5 brain tissues- femoral artery, olfactory tract, optic tract, cerebellar white matter, cerebral white matter." /clone_lib="NIH_MGC_181" /lab_host="DH10B" /note="Vector: pCMV-SPORT6.1" gene 1..2002 /gene="CNTF" /gene_synonym="HCNTF" /db_xref="GeneID:1270" /db_xref="HGNC:HGNC:2169" /db_xref="MIM:118945" CDS 76..678 /gene="CNTF" /gene_synonym="HCNTF" /codon_start=1 /product="ciliary neurotrophic factor" /protein_id="AAH68030.1" /db_xref="GeneID:1270" /db_xref="HGNC:HGNC:2169" /db_xref="MIM:118945" /translation="MAFTEHSPLTPHRRDLCSRSIWLARKIRSDLTALTESYVKHQGL NKNINLDSADGMPVASTDQWSELTEAERLQENLQAYRTFHVLLARLLEDQQVHFTPTE GDFHQAIHTLLLQVAAFAYQIEELMILLEYKIPRNEADGMPINVGDGGLFEKKLWGLK VLQELSQWTVRSIHDLRFISSHQTGIPARGSHYIANNKKM" BASE COUNT 626 a 409 c 427 g 540 t ORIGIN 1 cacatctctt atttggacca gtatagacag aagtaaaccc agctgacttg tttcctggga 61 cagttgagtt aagggatggc tttcacagag cattcaccgc tgacccctca ccgtcgggac 121 ctctgtagcc gctctatctg gctagcaagg aagattcgtt cagacctgac tgctcttacg 181 gaatcctatg tgaagcatca gggcctgaac aagaacatca acctggactc tgcggatggg 241 atgccagtgg caagcactga tcagtggagt gagctgaccg aggcagagcg actccaagag 301 aaccttcaag cttatcgtac cttccatgtt ttgttggcca ggctcttaga agaccagcag 361 gtgcatttta ccccaaccga aggtgacttc catcaagcta tacataccct tcttctccaa 421 gtcgctgcct ttgcatacca gatagaggag ttaatgatac tcctggaata caagatcccc 481 cgcaatgagg ctgatgggat gcctattaat gttggagatg gtggtctctt tgagaagaag 541 ctgtggggcc taaaggtgct gcaggagctt tcacagtgga cagtaaggtc catccatgac 601 cttcgtttca tttcttctca tcagactggg atcccagcac gtgggagcca ttatattgct 661 aacaacaaga aaatgtagca gttagtccct tctctcttcc ttgctttctc ttctaatgga 721 atatgcgtag ttccctgggg cctcgctttc ccatcttaaa tttctaaaaa cagttaagac 781 aacaggcatt ttctttcttt tttctctgac cacctgcagc ctgttgaagg actacaggta 841 ttttcatcaa gtagcgttgg agacatacac aaatgggcat acaagtttag cctggggggt 901 gtgatttgtg tgcgtgcttg catgtgctgc aggtgtaaga gagtgggagc agggacaacg 961 tccttccact tcagggttct aacctttcta acccactaag taacctctac aggcatttaa 1021 ctgccttaca gacagaatat acatatgtta attctagtcc tggatgactc ggtctgagaa 1081 gattcaattt aaaatcagac tctttagttg atttaaactc ttagagaata agaataataa 1141 tggctaactt ttattatctt ctatattaag gcagtatgcc aagggtcttt atgtatatta 1201 tgtacagcgt ttacaacctt gtgagcaagg tggtgttact cccattaggt agatgagaaa 1261 acaggctcac agagatttgg ttaagctcac acagctaaca agtagcacac tgagtttgaa 1321 cacagatcat tctccttgta aaagcctatg tgcctttcac tttagaggct tgatcatgaa 1381 tcactgcacc tctttgtcac agggtgttgg aagatgcatc catgtaatct attcccatcg 1441 ctggaaaaca gctgctgtta gatgtcctca gaagtcagtt gcaaatttta gcgttaaagt 1501 caggatttat tgttcatact tggcggtgag gagggcagct ggagatctta agattccatt 1561 ttggaaaatg attaggcccg ccaaacttct gaactttgga agctggggat gtttagtaat 1621 acagcctggt tttcaagtac tcactaaaag ttctcaaata ttgggttggg cacggcttat 1681 accaggttac ctcactttta attagtgatg caggcagtgt aacccaagca tttgtggaca 1741 atgagtggaa tactaaagtt aaaaagtcaa actttcacct cagattttct ggacttagtc 1801 atgaggagag ggtgaggccc actctgttcc tactggagat accagagact ctgaaactat 1861 agaataaagc ctctgtgctg cacaacaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1921 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1981 aaaaaaaaaa aaaaaaaaaa aa //