LOCUS BC066313 1363 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens activator of basal transcription 1, mRNA (cDNA clone
MGC:87175 IMAGE:5272771), complete cds.
ACCESSION BC066313
VERSION BC066313.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1363)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1363)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-FEB-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: o Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17572813.
FEATURES Location/Qualifiers
source 1..1363
/db_xref="H-InvDB:HIT000262204"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87175 IMAGE:5272771"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1363
/gene="ABT1"
/gene_synonym="hABT1"
/db_xref="GeneID:29777"
/db_xref="HGNC:HGNC:17369"
CDS 31..849
/gene="ABT1"
/gene_synonym="hABT1"
/codon_start=1
/product="activator of basal transcription 1"
/protein_id="AAH66313.1"
/db_xref="GeneID:29777"
/db_xref="HGNC:HGNC:17369"
/translation="MEAEESEKAATEQEPLEGTEQTLDAEEEQEESEEAACGSKKRVV
PGIVYLGHIPPRFRPLHVRNLLSAYGEVGRVFFQAEDRFVRRKKKAAAAAGGKKRSYT
KDYTEGWVEFRDKRIAKRVAASLHNTPMGARRRSPFRYDLWNLKYLHRFTWSHLSEHL
AFERQVRRQRLRAEVAQAKRETDFYLQSVERGQRFLAADGDPARPDGSWTFAQRPTEQ
ELRARKAARPGGRERARLATAQDKARSNKGLLARIFGAPPPSESMEGPSLVRDS"
BASE COUNT 319 a 366 c 379 g 299 t
ORIGIN
1 acgggcgtcg tgccgctcgt gtcagtcaac atggaggcag aggaatcgga gaaggccgca
61 acggagcaag agccgctgga agggacagaa cagacactag atgcggagga ggagcaggag
121 gaatccgaag aagcggcctg tggcagcaag aaacgggtag tgccaggtat tgtgtacctg
181 ggccatatcc cgccgcgctt ccggcccctg cacgtccgca accttctcag cgcctatggc
241 gaggtcggac gcgtcttctt tcaggctgag gaccggttcg tgagacgcaa gaagaaggca
301 gcagcagctg ccggaggaaa aaagcggtcc tacaccaagg actacaccga gggatgggtg
361 gagttccgtg acaagcgcat agccaagcgc gtggcggcca gtctacacaa cacgcctatg
421 ggtgcccgca ggcgcagccc cttccgttat gatctttgga acctcaagta cttgcaccgt
481 ttcacctggt cccacctcag cgagcacctc gcctttgagc gccaggtgcg caggcagcgc
541 ttgagagcgg aggttgctca agccaagcgt gagaccgact tctatcttca aagtgtggaa
601 cggggacaac gctttcttgc ggccgatggg gaccctgctc gcccagatgg ctcctggaca
661 tttgcccagc gtcctactga gcaggaactg agggcccgta aagcagcacg gccaggggga
721 cgtgaacggg ctcgcctggc aactgcccag gacaaggccc gctccaacaa aggactcctg
781 gccaggatct ttggagcccc gccaccctca gagagcatgg agggaccttc ccttgtcagg
841 gactcctgag ggcctgggtg gccccttcca tttcctggcc ctgctctgct tcctgtctac
901 ctcatactag aatgatcgtg actacccggg cagacatttt actgtgtttc tcagaccaag
961 tgtctactga tggcccaaac atggagtttt gtgggcttcc actgtcccca ctccgaactc
1021 ctgtatgtgc ctggctgagt cacctaattc atactgtcat actagcataa ttatgactat
1081 tgcatatgct tgttttgttt gactcttggc tgcctacgtc tgtagggtcc cctgaaaatc
1141 ccacttcctg cccccagaaa gggcctttat ttccaactag gaggataatg cctagtccag
1201 gcaatctttc tctgtttagc agtcacaggt gagggtggta ttagcatctt ttttatgtag
1261 aaaaaattga gttaatgggg tggactgggt tgggaagaaa tacatttcct aatgtattta
1321 tagaaaataa aaatattttt atgtgcctaa aaaaaaaaaa aaa
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