LOCUS BC064493 1699 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens myogenic differentiation 1, mRNA (cDNA clone MGC:71135 IMAGE:5022419), complete cds. ACCESSION BC064493 VERSION BC064493.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1699) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1699) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (22-DEC-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 50 Row: f Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 23111008. FEATURES Location/Qualifiers source 1..1699 /db_xref="H-InvDB:HIT000261413" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:71135 IMAGE:5022419" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1699 /gene="MYOD1" /gene_synonym="MYOD" /gene_synonym="PUM" /db_xref="GeneID:4654" /db_xref="HGNC:HGNC:7611" /db_xref="MIM:159970" CDS 63..1025 /gene="MYOD1" /gene_synonym="MYOD" /gene_synonym="PUM" /codon_start=1 /product="myogenic differentiation 1" /protein_id="AAH64493.1" /db_xref="GeneID:4654" /db_xref="HGNC:HGNC:7611" /db_xref="MIM:159970" /translation="MELLSPPLRDVDLTAPDGSLCSFATTDDFYDDPCFDSPDLRFFE DLDPRLMHVGALLKPEEHSHFPAAVHPAPGAREDEHVRAPSGHHQAGRCLLWACKACK RKTTNADRRKAATMRERRRLSKVNEAFETLKRCTSSNPNQRLPKVEILRNAIRYIEGL QALLRDQDAAPPGAAAAFYAPGPLPPGRGGEHYSGDSDASSPRSNCSDGMMDYSGPPS GARRRNCYEGAYYNEAPSEPRPGKSAAVSSLDCLSSIVERISTESPAAPALLLADVPS ESPPRRQEAAAPSEGESSGDPTQSPDAAPQCPAGANPNPIYQVL" BASE COUNT 353 a 579 c 497 g 270 t ORIGIN 1 cactttgcta tctacagctt gggttgggcg aagccaggac cgtgccgcgc caccgccagg 61 atatggagct actgtcgcca ccgctccgcg acgtagacct gacggccccc gacggctctc 121 tctgctcctt tgccacaacg gacgacttct atgacgaccc gtgtttcgac tccccggacc 181 tgcgcttctt cgaagacctg gacccgcgcc tgatgcacgt gggcgcgctc ctgaaacccg 241 aagagcactc gcacttcccc gcggcggtgc acccggcccc gggcgcacgt gaggacgagc 301 atgtgcgcgc gcccagcggg caccaccagg cgggccgctg cctactgtgg gcctgcaagg 361 cgtgcaagcg caagaccacc aacgccgacc gccgcaaggc cgccaccatg cgcgagcggc 421 gccgcctgag caaagtaaat gaggcctttg agacactcaa gcgctgcacg tcgagcaatc 481 caaaccagcg gttgcccaag gtggagatcc tgcgcaacgc catccgctat atcgagggcc 541 tgcaggctct gctgcgcgac caggacgccg cgccccctgg cgccgcagcc gccttctatg 601 cgccgggccc gctgcccccg ggccgcggcg gcgagcacta cagcggcgac tccgacgcgt 661 ccagcccgcg ctccaactgc tccgacggca tgatggacta cagcggcccc ccgagcggcg 721 cccggcggcg gaactgctac gaaggcgcct actacaacga ggcgcccagc gaacccaggc 781 ccgggaagag tgcggcggtg tcgagcctag actgcctgtc cagcatcgtg gagcgcatct 841 ccaccgagag ccctgcggcg cccgccctcc tgctggcgga cgtgccttct gagtcgcctc 901 cgcgcaggca agaggctgcc gcccccagcg agggagagag cagcggcgac cccacccagt 961 caccggacgc cgccccgcag tgccctgcgg gtgcgaaccc caacccgata taccaggtgc 1021 tctgagggga tggtggccgc ccacccgccc gagggatggt gcccctaggg tccctcgcgc 1081 ccaaaagatt gaacttaaat gcccccctcc caacagcgct ttaaaagcga cctctcttga 1141 ggtaggagag gcgggagaac tgaagtttcc gcccccgccc cacagggcaa ggacacagcg 1201 cggttttttc cacgcagcac ccttctcgga gacccattgc gatggccgct ccgtgttcct 1261 cggtgggcca gagctgaacc ttgaggggct aggttcagct ttctcgcgcc ctcccccatg 1321 ggggtgagac cctcgcagac ctaagccctg ccccgggatg caccggttat ttgggggggc 1381 gtgagaccca gtgcactccg gtcccaaatg tagcaggtgt aaccgtaacc cacccccaac 1441 ccgtttcccg gttcaggacc actttttgta atacttttgt aatctattcc tgtaaataag 1501 agttgctttg ccagagcagg agcccctggg gctgtattta tctctgaggc atggtgtgtg 1561 gtgctacagg gaatttgtac gtttataccg caggcgggcg agccgcgggc gctcgctcag 1621 gtgatcaaaa taaaggcgct aatttataaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1681 aaaaaaaaaa aaaaaaaaa //