LOCUS BC060790 4128 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens suppressor of cytokine signaling 4, mRNA (cDNA clone MGC:71581 IMAGE:30338646), complete cds. ACCESSION BC060790 VERSION BC060790.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4128) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4128) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Stefan Hansson cDNA Library Preparation: Michael Brownstein / Ted Usdin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 133 Row: d Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40807479. FEATURES Location/Qualifiers source 1..4128 /db_xref="H-InvDB:HIT000260092" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:71581 IMAGE:30338646" /tissue_type="Placenta, pre-eclamptic" /clone_lib="NIH_MGC_148" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4128 /gene="SOCS4" /db_xref="GeneID:122809" /db_xref="HGNC:HGNC:19392" CDS 444..1766 /gene="SOCS4" /codon_start=1 /product="suppressor of cytokine signaling 4" /protein_id="AAH60790.1" /db_xref="GeneID:122809" /db_xref="HGNC:HGNC:19392" /translation="MAENNENISKNVDVRPKTSRSRSADRKDGYVWSGKKLSWSKKSE SYSDAETVNGIEKTEVSLRNQERKHSCSSIELDLDHSCGHRFLGRSLKQKLQDAVGQC FPIKNCSSRHSSGLPSKRKIHISELMLDKCPFPPRSDLAFRWHFIKRHTAPINSKSDE WVSTDLSQTELRDGQLKRRNMEENINCFSHTNVQPCVITTDNALCREGPMTGSVMNLV SNNSIEDSDMDSDDEILTLCTSSRKRNKPKWDLDDEILQLETPPKYHTQIDYVHCLVP DLLQINNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHAR IEQWNHNFSFDAHDPCVFHSPDITGLLEHYKDPSACMFFEPLLSTPLIRTFPFSLQHI CRTVICNCTTYDGIDALPIPSSMKLYLKEYHYKSKVRVLRIDAPEQQC" BASE COUNT 1307 a 722 c 752 g 1347 t ORIGIN 1 gcggcgccca gggaaccggc ggaggcgatg accgtgacgg ctgggttggg accggaacgc 61 cgaagcgggg ttgggggtgg cagaaaagca tctgctttgt aagacctaca cgaggtgcag 121 gagtggttgg gcctcccctc tccacttaag caagcgccca gactgatggc gatggtgatg 181 gcagcagtta ctcgcacaac cccagttaag ctgcgctccg ggaggagttc atctgttgtc 241 tgctctccag tgacttccgt ttgtggagcc taagtgtttc tacagaatcc aactcaaata 301 tcaaggacta tgatcagaat gctttcaagg agtttttggg cacatgatgg cagatacatc 361 cagaaagtgc ccagaagaaa cttcctgctg gaaaaaatga aaaagcagta tttataacat 421 tagaatctgg ataatttgtt aacatggcag aaaataatga aaatattagt aaaaatgtag 481 atgtaaggcc caaaactagt cggagcagaa gtgccgacag aaaagacggt tatgtgtgga 541 gtggaaagaa gttatcttgg tcaaaaaaga gtgagagtta ttcagatgct gagacagtga 601 atggtataga gaaaaccgaa gtgtctttaa ggaaccaaga aaggaagcac agctgttcat 661 ccattgagtt ggacttagat cattcctgtg ggcatcgatt tttaggccga tctcttaaac 721 agaaactgca agatgccgtg gggcagtgtt ttccaataaa gaattgtagt agtcggcact 781 cttcagggct tccgtctaaa aggaaaattc atatcagtga actcatgtta gataagtgtc 841 ctttcccacc tcgatcagat ttagccttta ggtggcattt tattaaacga cacactgctc 901 ctataaattc caaatcagat gaatgggtaa gcacagactt gtctcagact gaattgaggg 961 atggtcagct aaaacgaaga aatatggaag aaaatataaa ctgtttctca cataccaatg 1021 ttcagccctg tgtcataacc accgacaatg ctttgtgtag agaaggtcct atgactggct 1081 ctgtgatgaa cctggtttca aataacagta tagaagatag tgatatggat tccgatgatg 1141 aaattctaac actttgcaca agttccagaa aaagaaacaa acccaaatgg gatttggatg 1201 atgaaatcct gcagttggaa acacctccta aataccacac gcagattgat tatgtccact 1261 gtcttgtacc agacctcctt cagatcaata acaacccatg ttactgggga gtgatggata 1321 aatacgcagc cgaagcacta ctggaaggaa aaccagaggg taccttttta cttcgagact 1381 cagcacagga agactattta ttctctgtta gttttagacg ctatagtcgt tctcttcatg 1441 ctagaattga acagtggaat cacaacttta gctttgatgc acatgacccc tgtgtcttcc 1501 attctcctga cattactggg ctcctagaac attataagga cccaagcgcc tgtatgttct 1561 ttgaaccact tctatccact cccttaattc ggactttccc tttttccctg cagcatatat 1621 gcagaacagt tatttgtaac tgtacaactt atgatggcat cgatgccctt ccaattcctt 1681 cttctatgaa attatatctg aaggaatatc attataaatc aaaagttaga gtactcagga 1741 ttgatgcacc agaacagcaa tgctagtaac aggatgggaa catgggaatg ataatatata 1801 ttttttcttt taatatttta tttttctttt tatgccactt tggatttttc tacaaaggca 1861 gtggtgtcca aaataaaatc tctgccctaa attttactaa taaatccatt tttctagtga 1921 tacacaaatt gtttaaggtt atacactcga gcttaaatag atatttttaa ccaggtgttt 1981 ggtttttgtt tttaccgtgt aggttgtata cttacatttt ttctttcctt aatttataca 2041 tgatcctttt tccttaattt atacatgatc caggcacatt tgaaatttgg taggcattgc 2101 aaacacattt gaatattgtg tatttcatac tattctttaa aagtaatctt atgtcctttc 2161 ctacatgtaa aatattttgt taatctatgc cattagtagt attatatata aaatatagtt 2221 ccccgtcccc cttttcattg agtttgatat tcttcagtaa agctgaatgt tgtaattcac 2281 cattcatact aatgttattg acttttgtaa cttactaata gggatgttaa aagtaacaaa 2341 accaagtcaa acttggtgta tttttatttt aaatattaac tctaaagcag gattactaaa 2401 tttgattaat ctggtcaatg agaatcaaat ggaaacatat cattctggag gtgcacttac 2461 tcttctacaa tgtggccgga tcatttgtca ttcctgaata ggtctttctc tcaacctgca 2521 agagctaaac catcttcaaa acataaatct tgttcctttc tcattggaag ctttgaaaat 2581 aatgataaca ctattagtag ctagtagtta ctaaagtgct aaagtaattg tggggttttt 2641 ctgtattagc ttatgaactg ttgcttctac ttagcccttt tatagaaact ctgagctgtt 2701 actttgggga aattccacaa tgtattagca gccacaaatt tccactggta accaaagagt 2761 acctaagtag tttttcatta ttttaagttg aatttgaata aagattccag aaataaacat 2821 ggagctcagt attcaggaag cttaatactg tttttgatct acaagatcca aataattatc 2881 cctatcttca gaattaactt agtctgtaat gtggcttcaa aaaaagaaag ccttttgaca 2941 gctacatgac ttacaccata cagaacagta ctggacaaaa ggggtgatat tttaaattta 3001 ctatcccaga aacagggcaa cgtttttaga aacatcttta gcccaaagta actagtaaaa 3061 ataaatggag tggtatccta tcttcttttt ttaaggaatc aatgaataat aaatgtagat 3121 agacaatttt cttctggtga gctgtctaac cctttgtaca cattgacatt tttaatatcg 3181 taactgattt cttgatgcta gtttagctat attaggaaac tgcttctacc tagattgaaa 3241 gaaatttgac tcataaactt ccaagttaga acaaatattt cttcattatt gttgctttta 3301 tgtgagtagc atttccctat cttgcagttc tgttaacatg aaaatggcat ttttccataa 3361 tagctttaaa ataatttttt agtaattatt acaaaattaa ggaaaatctc tattaccgtt 3421 atcttttagc attttttttt tcctcagtga tctcaagatt gtcttagtct caatgagatg 3481 tagctacaaa aatggcacct cttagcagtg atgaggctca ggatatcgga tatcataaca 3541 ccaatgtcag gataaatatc tcttctaaag acgatattta ccttttacaa ggttagaaaa 3601 gtctcatact acctcatctt tattgtggcg cttttgtaga tcactgagaa gcttatctta 3661 ttaaccaata taccacttcc taaatatcca tctttggtga aagaaaatag tgtggtaaga 3721 gtacccatga ttatagtttt ttatcagaat ttgataagat tttctgtttc tgtgaaacaa 3781 ttattttaaa tatttttctt ttaaaaataa ctttttatca gtacagaaaa acctaaggga 3841 tgactagctt acaaatattc tgttaagggg tagttttata aagaaaaatg atatatagtt 3901 atgttgtctt ttatagtgtt aaaattagta tttatatgaa agtcaagatc taagtacctt 3961 ttcatataat tcaaactgat tgcttgtgat atgttttctc tggctttttt attttttcaa 4021 cttcaaggta ttaacagctg ttaacactta aaaagtactg ccacatatgt agccttgaag 4081 tagttgatct aataaatgag agcagggagg agaaaaaaaa aaaaaaaa //