LOCUS BC060786 4094 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens ArfGAP with SH3 domain, ankyrin repeat and PH domain 3, mRNA (cDNA clone MGC:71572 IMAGE:5298355), complete cds. ACCESSION BC060786 VERSION BC060786.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4094) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4094) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 133 Row: p Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19923539. FEATURES Location/Qualifiers source 1..4094 /db_xref="H-InvDB:HIT000260088" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:71572 IMAGE:5298355" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4094 /gene="ASAP3" /gene_synonym="ACAP4" /gene_synonym="CENTB6" /gene_synonym="UPLC1" /db_xref="GeneID:55616" /db_xref="HGNC:HGNC:14987" CDS 73..2784 /gene="ASAP3" /gene_synonym="ACAP4" /gene_synonym="CENTB6" /gene_synonym="UPLC1" /codon_start=1 /product="ArfGAP with SH3 domain, ankyrin repeat and PH domain 3" /protein_id="AAH60786.1" /db_xref="GeneID:55616" /db_xref="HGNC:HGNC:14987" /translation="MPEQFSVAEFLAVTAEDLSSPAGAAAFAAKMPRYRGAALAREEI LEGDQAILQRIKKAVRAIHSSGLGHVENEEQYREAVESLGNSHLSQNSHELSTGFLNL AVFTREVAALFKNLIQNLNNIVSFPLDSLMKGQLRDGRQDSKKQLEKAWKDYEAKMAK LEKERDRARVTGGIPGEVAQDMQRERRIFQLHMCEYLLKAGESQMKQGPDFLQSLIKF FHAQHNFFQDGWKAAQSLFPFIEKLAASVHALHQAQEDELQKLTQLRDSLRGTLQLES REEHLSRKNSGCGYSIHQHQGNKQFGTEKVGFLYKKSDGIRRAWQKRKCGVKYGCLTI SHSTINRPPVKLTLLTCQVRPNPEEKKCFDLVTHNRTYHFQAEDEHECEAWVSVLQNS KDEALSSAFLGEPSAGPGSWGSAGHDGEPHDLTKLLIAEVKSRPGNSQCCDCGAADPT WLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLDLLGPSELLLALNMGNTSFNEVMEA QLPSHGGPKPSAESDMGTRRDYIMAKYVEHRFARRCTPEPQRLWTAICNRDLLSVLEA FANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNT ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTF AFPLHVDYSWVISTEPGSDSEEDEEEKRCLLKLPAQAHWASGRLDISNKTYETVASLG AATPQGESEDCPPPLPVKNSSRTLVQGCARHASGDRSEVSSLSSEAPETPESLGSPAS SSSLMSPLEPGDPSQAPPNSEEGLREPPGTSRPSLTSGTTPSEMYLPVRFSSESTRSY RRGARSPEDGPSARQPLPRRNVPVGITEGDGSRTGSLPASSVQLLQD" BASE COUNT 933 a 1173 c 1171 g 817 t ORIGIN 1 gagtccggct cagcgcggag cagctcagtg ccccccgcgc tccgctccgg cagctccacg 61 ctcgcgcccg ccatgccgga gcagttcagc gtcgccgagt tcctggccgt caccgcggag 121 gacctcagct ccccggctgg ggccgccgcc ttcgccgcca agatgccccg gtaccgaggg 181 gcggcgctgg cgcgggagga gatcttggaa ggagaccaag ccatcctgca gagaataaag 241 aaggctgtgc gggcaatcca tagctccggc cttggccatg tggagaatga agagcagtac 301 cgagaggccg tggaatcctt aggcaacagc cacctgtccc agaacagcca tgagctgtcc 361 acaggcttcc taaacttggc cgtgttcacc cgcgaggttg ctgcgctctt caagaacctg 421 attcagaact tgaacaacat tgtctctttc cccctggaca gtctgatgaa ggggcagctg 481 agggacggtc gacaggattc caaaaaacag ctggagaagg catggaagga ctatgaagcc 541 aaaatggcca agctggagaa ggagcgcgat cgggccaggg tgacaggagg gatccctggg 601 gaggtggccc aggacatgca gagagagcgg cgcatcttcc agctgcacat gtgtgagtat 661 ctgctcaaag ccggggagag ccagatgaag caaggtcctg acttccttca gagcctcatc 721 aagttcttcc acgcccagca caactttttc caagatggct ggaaggctgc ccagagcctg 781 ttccccttca tcgagaagct ggcggcctca gtacatgcac tccatcaggc ccaggaggac 841 gaactacaga agctgaccca gctccgggac tccctccgag ggacactgca gcttgagagc 901 agagaggaac acctgagccg gaagaactca ggatgtggct atagcatcca ccagcaccaa 961 ggcaacaagc agtttgggac ggagaaagtg ggctttctat acaagaaaag tgacggaatt 1021 cgaagagcct ggcagaaaag gaagtgtgga gtcaagtatg gctgcctgac catctcacac 1081 agcacgataa accggccccc ggtgaagctg accctgctga cgtgccaagt gaggccaaac 1141 cctgaggaga aaaagtgctt cgacctggtg acccacaacc ggacgtacca ctttcaggca 1201 gaggacgagc acgagtgtga ggcgtgggtg tcagtgttgc agaacagcaa ggacgaagcc 1261 ctgagcagcg ccttcctcgg ggagcccagc gctggcccgg ggtcctgggg gtccgccggc 1321 catgatgggg agccgcacga cctcacaaag ctgctcatcg cggaggtgaa gagcaggcct 1381 gggaatagcc agtgctgcga ctgcggggct gcagacccca cgtggctcag caccaacctg 1441 ggcgtgctca cctgcatcca gtgctcgggc gtccaccgcg aactgggcgt gcgcttttcg 1501 cgcatgcagt cactcacctt ggacctgctg ggcccctccg agttgttgct ggccttgaac 1561 atgggaaaca cgagcttcaa tgaggtcatg gaggcccagc taccctcaca cggcggccct 1621 aaaccctcag ctgagagtga catgggcacc cgcagggact acattatggc caagtatgtg 1681 gagcataggt ttgcacgccg gtgcacacct gagcctcagc gactctggac agccatttgc 1741 aacagggacc tcctgtcggt actggaggcc tttgccaatg ggcaggactt tggacagccg 1801 ctgccagggc ctgatgcaca ggcacctgaa gaactcgtct tgcatttggc tgtcaaagtc 1861 gccaaccagg cttccctgcc tctggtggat ttcatcatcc agaacggtgg tcacctggat 1921 gccaaggctg ctgacgggaa cacggctctg cactacgcag cactctacaa ccagcccgac 1981 tgcctcaagc tgctgctgaa ggggagagct ttggttggca cagtaaatga agcaggcgag 2041 acagctctgg acatagccag gaagaagcac cacaaggagt gtgaggagct gctggagcag 2101 gcccaggcgg ggacctttgc cttccctcta catgtggact actcctgggt aatttccaca 2161 gagcctggct ctgacagtga ggaggatgag gaagagaagc gctgcttgct gaagctcccg 2221 gcccaggctc actgggccag tgggaggctg gacatcagca acaagaccta tgagactgtc 2281 gccagcctgg gagcagccac ccctcagggc gagagtgagg actgtccccc gcccttgcca 2341 gtcaaaaact cttctcggac tttggtccaa gggtgtgcaa gacatgccag tggagatcgt 2401 tctgaagtct ccagcctgag ttcagaggcc cctgagaccc ctgagagcct gggcagtcca 2461 gcctcctcct ccagtctgat gagccccttg gaacctgggg atcccagcca agccccaccc 2521 aactctgaag agggcctccg agagccccca ggcacctcca gacccagcct gacatccggg 2581 accacccctt cggagatgta cctccccgtc agattcagct ccgagagcac tcgctcctat 2641 cggcgggggg cgcggagccc tgaagatggt ccctcagcca ggcagcctct gcccagaagg 2701 aacgtgccgg ttggcatcac tgaaggagat ggctcaagga ctgggagtct cccagcaagt 2761 tctgtgcaac ttttgcaaga ctagctcctt gctggccccc acatgcccca tgctaggccc 2821 caatgttcag agctgggact tgagctcaca aaactgggga gctgagacat ttgttctctt 2881 ggatctcact ctctctgtcc cttgtgcctc tgtagctggc cttcttcctg ccacaggcca 2941 tgcctctacc aaggacacat ggcctttccc tgttagggct gatggcggtt ctttcctatc 3001 tcattacccg ctaggggcct gggagccctg tggctggatc tgagtgctcc tgagctggct 3061 tcagctgcag aactctcagt ccctcatcag atcgagactc tatttccccc gtcagtctgg 3121 gggcttcaca agggcaggag agccctccat cactgacttc cagatcaggg accctgccaa 3181 gtagggactg tcttctcagc cagccattta ttagtctaat attccttcac taaattccaa 3241 ctctatgtct ggacctgtgt taggcacttc agataccaca cgagtaagac aagggccctg 3301 caggggtggt cctttggtgg aaagctggtc ttaagggttg ggcttgggaa taggcagggt 3361 cagattccag ggcatggctc tggactcagc tggtttatac ctatatgacc attacagttg 3421 tctacagatc acatccattc tggctggtca acatgcatgc tgtactggct gttaaataaa 3481 aatattctga atgtcactcc ttttgaggga cagcacagcc ttccctaggc attctcctat 3541 attccccagc caaattgtag agtcagatgc acccacattt gcctgtgtcc ttgatttagc 3601 aggaaggaaa ggaatagtcg gggttgatgg atgcccactt ctcttctctt tctcttggtc 3661 aactcaggag ccttttagtc tgagggaatg gagaggcaaa gaaagaaggg agagtaatag 3721 aattgggagg gcagagactt aagggttctg cttcccagcc ctagaaattc tatcattgct 3781 cagccccaat gagaaagcag atacacctaa gccatcatca accactaaca tctcaacttg 3841 ccagttgctg ggtgctgggc cctggcagga atgggccaag ccaagcaggg gagactagag 3901 agcaccaatg gccaacacag ctgcctggct ggggaggctg tgctgtttcc cctggagacc 3961 tgactggtct gtggttccca caggaacagg gttgtctttt gagcccccag tgtctggttt 4021 cattcatctc agacttgtta tttcactcat ctctaataaa ggattggggg gtcagttaaa 4081 aaaaaaaaaa aaaa //