LOCUS BC057396 5219 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens SH3-domain binding protein 4, mRNA (cDNA clone MGC:60352 IMAGE:6138465), complete cds. ACCESSION BC057396 VERSION BC057396.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5219) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5219) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-SEP-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 110 Row: j Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 7657561. FEATURES Location/Qualifiers source 1..5219 /db_xref="H-InvDB:HIT000259695" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:60352 IMAGE:6138465" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..5219 /gene="SH3BP4" /gene_synonym="BOG25" /gene_synonym="TTP" /db_xref="GeneID:23677" /db_xref="HGNC:HGNC:10826" /db_xref="MIM:605611" CDS 405..3296 /gene="SH3BP4" /gene_synonym="BOG25" /gene_synonym="TTP" /codon_start=1 /product="SH3-domain binding protein 4" /protein_id="AAH57396.1" /db_xref="GeneID:23677" /db_xref="HGNC:HGNC:10826" /db_xref="MIM:605611" /translation="MAAQRIRAANSNGLPRCKSEGTLIDLSEGFSETSFNDIKVPSPS ALLVDNPTPFGNAKEVIAIKDYCPTNFTTLKFSKGDHLYVLDTSGGEWWYAHNTTEMG YIPSSYVQPLNYRNSTLSDSGMIDNLPDSPDEVAKELELLGGWTDDKKVPGRMYSNNP FWNGVQTNPFLNGNVPVMPSLDELNPKSTVDLLLFDAGTSSFTESSSATTNSTGNIFD ELPVTNGLHAEPPVRRDNPFFRSKRSYSLSELSVLQAKSDAPTSSSFFTGLKSPAPEQ FQSREDFRTAWLNHRKLARSCHDLDLLGQSPGWGQTQAVETNIVCKLDSSGGAVQLPD TSISIHVPEGHVAPGETQQISMKALLDPPLELNSDRSCSISPVLEVKLSNLEVKTSII LEMKVSAEIKNDLFSKSTVGLQCLRSDSKEGPYVSVPLNCSCGDTVQAQLHNLEPCMY VAVVAHGPSILYPSTVWDFINKKVTVGLYGPKHIHPSFKTVVTIFGHDCAPKTLLVSE VTRQAPNPAPVALQLWGKHQFVLSRPQDLKVCMFSNMTNYEVKASEQAKVVRGFQLKL GKVSRLIFPITSQNPNELSDFTLRVQVKDDQEAILTQFCVQTPQPPPKSAIKPSGQRR FLKKNEVGKIILSPFATTTKYPTFQDRPVSSLKFGKLLKTVVRQNKNHYLLEYKKGDG IALLSEERVRLRGQLWTKEWYIGYYQGRVGLVHTKNVLVVGRARPSLCSGPELSTSVL LEQILRPCKFLTYIYASVRTLLMENISSWRSFADALGYVNLPLTFFCRAELDSEPERV ASVLEKLKEDCNNTENKERKSFQKELVMALLKMDCQGLVVRLIQDFVLLTTAVEVAQR WRELAEKLAKVSKQQMDAYESPHRDRNGVVDSEAMWKPAYDFLLTWSHQIGDSYRDVI QELHLGLDKMKNPITKRWKHLTGTLILVNSLDVLRAAAFSPADQDDFVI" BASE COUNT 1321 a 1424 c 1344 g 1130 t ORIGIN 1 cgcccaggcg cgggaccacc ctccgcccgc cgaggcgggg gcccagcgcg cccggcactc 61 tcggcggtcc gggcccctcg ccactaccgc cgccgccgcc gccgtgagtc ccgcggagcc 121 gcgcgcgccc ccggctgggc cgagccgctg gccgacgagc ggagcctcag gagccggcgg 181 ggacgccatg cgagccagcg tctcccttct ctcctggaca gaaggccgtg tcctgggact 241 tctctgatgg cgagaggctg cggctgtacc aggaagaaac atattgccga gtggatgccg 301 ccgcgcagcg tgtttgcttg aggcagaagc ttcagcatct gctgggataa ctggaggaag 361 aaatatgaag ccttagcggc tttacccggg aagcgagttt cgagatggcg gctcagcgga 421 tccgagcggc caactccaat ggcctccctc gctgcaagtc agaggggacc ctgattgacc 481 tgagcgaagg gttttcagag acgagcttta atgacatcaa agtgccttct cccagtgcct 541 tgctcgtaga caaccccaca cctttcggaa atgcaaagga agtgattgcg atcaaggact 601 attgccccac caacttcacc acactgaagt tctccaaggg cgaccatctc tacgtcttgg 661 acacatctgg cggtgagtgg tggtacgcac acaacaccac cgaaatgggc tacatcccct 721 cctcctatgt gcagcccttg aactaccgga actcaacact gagtgacagc ggtatgattg 781 ataatcttcc agacagccca gacgaggtag ccaaggagct ggagctgctc gggggatgga 841 cagatgacaa aaaagtacca ggcagaatgt acagtaataa ccctttctgg aatggggtcc 901 agaccaatcc atttctgaat gggaacgtgc ccgtcatgcc cagcctggat gagctgaatc 961 ccaaaagtac tgtggatttg ctcctttttg acgcaggtac atcctccttc accgaatcca 1021 gctcagccac cacgaatagc actggcaaca tcttcgatga gcttccagtc acaaacggac 1081 tccacgcaga gccgccggtc aggcgggaca accccttctt cagaagcaag cgctcctaca 1141 gtctctcgga actctccgtc ctccaagcca agtccgatgc tcccacatcg tcgagtttct 1201 tcaccggctt gaaatcacct gcccccgagc aatttcagag ccgggaggat tttcgaactg 1261 cctggctaaa ccacaggaag ctggcccggt cttgccacga cctggacttg cttggccaaa 1321 gccctggttg gggccagacc caagccgtgg agacaaacat cgtgtgcaag ctggatagct 1381 ccgggggtgc tgtccagctt cctgacacca gcatcagcat ccacgtgccc gagggccacg 1441 tcgcccctgg ggagacccag cagatctcca tgaaagccct gctggacccc ccgctggagc 1501 tcaacagtga caggtcctgc agcatcagcc ctgtgctgga ggtcaagctg agcaacctgg 1561 aggtgaaaac ctctatcatc ttggagatga aagtgtcagc cgagataaaa aatgaccttt 1621 ttagcaaaag cacagtgggc ctccagtgcc tgaggagcga ctcgaaggaa gggccatatg 1681 tctccgtccc gctcaactgc agctgtgggg acacggtcca ggcacagctg cacaacctgg 1741 agccctgtat gtacgtggct gtcgtggccc atggcccaag catcctctac ccttccaccg 1801 tgtgggactt catcaataaa aaagtcacag tgggtctcta cggccctaaa cacatccacc 1861 catccttcaa gacggtagtg accatttttg ggcatgactg tgccccaaag acgctcctgg 1921 tcagcgaggt cacacgccag gcacccaacc ctgccccggt ggccctgcag ctgtggggga 1981 agcaccagtt cgttttgtcc aggccccagg atctcaaggt ctgtatgttt tccaatatga 2041 cgaattacga ggtcaaagcc agcgagcagg ccaaagtggt gcgaggattc cagctgaagc 2101 tgggcaaggt gagccgcctg atcttcccca tcacctccca gaaccccaac gagctctctg 2161 acttcacgct gcgggttcag gtgaaggacg accaggaggc catcctcacc cagttttgtg 2221 tccagactcc tcagccaccc cctaaaagtg ccatcaagcc ttccgggcaa aggaggtttc 2281 tcaagaagaa cgaagtcggg aaaatcatcc tgtccccgtt tgccaccact acaaagtacc 2341 cgactttcca ggaccgcccg gtgtccagcc tcaagtttgg taagttgctc aagactgtgg 2401 tgcggcagaa caagaaccac tacctgctgg agtacaagaa gggcgacggg atcgccctgc 2461 tcagcgagga gcgggtcagg ctccggggcc agctgtggac caaggagtgg tacatcggct 2521 actaccaggg cagggtgggc ctcgtgcaca ccaagaacgt gctggtggtc ggcagggccc 2581 ggcccagcct gtgctcgggc cccgagctga gcacctcggt gctgctggag cagatcctgc 2641 ggccctgcaa attcctcacg tacatctatg cctccgtgag gaccctgctc atggagaaca 2701 tcagcagctg gcgctccttc gctgacgccc tgggctacgt gaacctgccg ctcacctttt 2761 tctgccgggc agagctggat agtgagcccg agcgggtggc gtccgtccta gaaaagctga 2821 aggaggactg taacaacact gagaacaaag aacggaagtc cttccagaag gagcttgtga 2881 tggccctact gaagatggac tgccagggcc tggtggtcag actcatccag gactttgtgc 2941 tcctgaccac ggctgtagag gtggcccagc gctggcggga gctggctgag aagctggcca 3001 aggtctccaa gcagcagatg gacgcctacg agtctcccca ccgggacagg aacggggttg 3061 tggacagcga ggccatgtgg aagcctgcgt atgacttctt actcacctgg agccatcaga 3121 tcggggacag ctaccgggat gtcatccagg agctgcacct gggcctggac aagatgaaaa 3181 accccatcac caagcgctgg aagcacctca ctgggactct gatcttggtg aactccctgg 3241 acgttctgag agcagccgcc ttcagccctg cggaccagga cgacttcgtg atttgaatgg 3301 gtcccctccc ctcctgctgc tctggagtgc aagccctctt ctgccctgcg tgccctgctg 3361 tcaccgcgga gctgaagagg gaggaagggg cggctgctca gacagattta gggcccgcca 3421 gctaggctac acccatcatg cgccgccctc ctccatcgag ggagaggcct gaagggactg 3481 cctactgcag ctcgttgcca atcacatagc tttctatttg ttaagtataa atttaaattt 3541 aaaatcactt ttttaacgaa tggggggaag ggatctatga gaaaggtggt atctaatttt 3601 tttatggacc ataaaggttt aaaagaaaat aggggcacag gctgttgagg tttttatgtt 3661 gttatagacc tttttaaatt atgttagaga tgtatatagg tatttaaagg tcactgggag 3721 cgtttctgat tcccggccac actttgcatt tcaacactca gcccggaaag atgctcgttc 3781 ggttgttgga cctctttcac tccctgcgtg taagaaggtg aatcacgtgg gaaaaagtgg 3841 cttttcagta aacgggtaca gctcattctt tctgagaagg ccccaggtcc tgctccctcc 3901 tcggatttga ttgtcttccg tgctttgcct cactcgtagt aaatgaccat ccatagaata 3961 tgtgaatctt tggtgagctt cagtgggcag agtgaagtcc cgcattagca tttaggtgcc 4021 ctgagctgtt tctgccaata gattagaaag cagccatgag ttgacagtct ttagggcccc 4081 tgccagtgtg caattagtca ttgacaagaa caatgccatt tgagagtgag gtggtccctg 4141 ctgctacgag gccattgtac tgttttttcc ttgaggtcaa agcagtgctt cccatagagt 4201 ttgctgcctc ttctgtggac aggaagaaaa cttcatgacc gaatcagagc cttggtggcc 4261 actgactctc gtgcttattg cagatgctgt ggttggcctc acaagcaacg ccttatgctg 4321 atgtgcagag gtgccagctg ccatttgcca aactctgcat ttcatttcat ctaaggctta 4381 acccctcttc cttcctggtg tacctgtgtc tcctcggaag gaagtcatag tttagatgaa 4441 accatttttt gtacaatgta aagatcatct gagcaagatg agcattttgt aaaaatgaaa 4501 atgtgactca cataaaatca ggaacttgac acagtgttgc attaataact ttagggtgca 4561 gacatgctgt gtgaatctca caatgcgtcg tagatgtcgc gtgttggaag ggagcaggag 4621 gaaggactga tactggcaaa tcagtagagt gaggtgatcc ttagcaacgt gccaggacac 4681 ttcctgtgtg cctgcagttg tcagggacca tttgggatcc cgaatctcat tctctaaaac 4741 tgctttcttg aaacatgtta cttccttagt ataatcaatg tatactccct tactggcctg 4801 aaacgttgta tagctactta ttcagatact gaagaccaac ggactgaaaa aaagaacaaa 4861 cattagctat tttatgctgc aagaaccagg acacacaatt cgccaatcat cccaccatat 4921 aaccttcgat tgtgcttctc aactccaccc cataatttct cccagagacc atctatcacc 4981 ttttccccaa agaagaaaca aaaccagttg caccttaaac catggatatt ttttcctcag 5041 gggctttaaa tagtttccta tgcaacgtgt cttgtagcac aaataaaatt ctacaaaagt 5101 tgcagtaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 5161 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //