LOCUS BC050291 3037 bp mRNA linear HUM 23-JUN-2006 DEFINITION Homo sapiens glucocorticoid induced transcript 1, mRNA (cDNA clone MGC:43752 IMAGE:5272003), complete cds. ACCESSION BC050291 VERSION BC050291.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3037) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3037) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 74 Row: p Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 55742677. FEATURES Location/Qualifiers source 1..3037 /db_xref="H-InvDB:HIT000053404" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:43752 IMAGE:5272003" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3037 /gene="GLCCI1" /gene_synonym="FAM117C" /gene_synonym="GIG18" /db_xref="GeneID:113263" /db_xref="HGNC:HGNC:18713" CDS 560..2203 /gene="GLCCI1" /gene_synonym="FAM117C" /gene_synonym="GIG18" /codon_start=1 /product="glucocorticoid induced transcript 1" /protein_id="AAH50291.1" /db_xref="GeneID:113263" /db_xref="HGNC:HGNC:18713" /translation="MSTASSSSSSSSSQTPHPPSQRMRRSAAGSPPAVAAAGSGNGAG GGGGVGCAPAAGAGRLLQPIRATVPYQLLRGSQHSPTRPPVAAAAASLGSLPGPGAAR GPSPSSPTPPAAAAPAEQAPRAKGRPRRSPESHRRSSSPERRSPGSPVCRADKAKSQQ VRTSSTIRRTSSLDTITGPYLTGQWPRDPHVHYPSCMKDKATQTPSCWAEEGAEKRSH QRSASWGSADQLKEQIAKLRQQLQRSKQSSRHSKEKDRQSPLHGNHITISHTQATGSR SVPMPLSNISVPKSSVSRVPCNVEGISPELEKVFIKENNGKEEVSKPLDIPDGRRAPL PAHYRSSSTRSIDTQTPSVQERSSSCSSHSPCVSPFCPPESQDGSPCSTEDLLYDRDK DSGSSSPLPKYASSPKPNNSYMFKREPPEGCERVKVFEEMASRQPISAPLFSCPDKNK VNFIPTGSAFCPVKLLGPLLPASDLMLKNSPNSGQSSALATLTVEQLSSRVSFTSLSD DTSTAGSMEASVQQPSQQQQLLQELQGEDHISAQNYVII" BASE COUNT 721 a 891 c 769 g 656 t ORIGIN 1 agttagttgc cattcggagt gaggagtggg tagaagcggc ggcggcggcg gcggcgtttg 61 cggtggcgcg gactccgagg agcgccagca cctcgaggcc ctttctctct accctggtcc 121 ccagaagcag gggtcccggc cctccttgca gctgccgggt tctcccgtgc gtgcagccct 181 gcgagggctg aggagaaggc tgcgagcggc cctcggggct gcgtgatccg ggccgttgcc 241 ctgtcagcac gatgcctgga gcggtggcgg cggcggctcc gggctccttg cggccccggc 301 cgtgaccgcc acaccgagcc cagccgggcg gttgcggccg ttggacgttt gttttcgcag 361 ccttcccctc ccccctcgcc gaggcggcgg gggtgtgcgt tggggagggg gagccccgag 421 actcctcccc cacagcgata cccccgcccc tcccccttac acactcgcac gcactatcgc 481 gccggctccc acacgctcgc gcgcctcccg ccccgcgcct ccgtgtcggc cggcggcgtc 541 cagggcccgc agagccacca tgtccactgc ctcctcctcc tcctcctcca gttcctctca 601 gacccctcat cccccgtcgc agaggatgag gcgcagcgcc gcggggtccc cgcccgccgt 661 cgccgccgcc gggagcggga acggtgcggg cggcggcggc ggcgtgggct gcgccccggc 721 tgcgggagcc ggccggctgc tgcagcccat ccgcgccacg gtgccctacc agctcttgcg 781 gggcagccag cacagtccca cgcgtccgcc cgtcgccgct gccgccgcct cgctgggcag 841 cctcccgggg cccggcgcgg cccgcggccc cagcccgtcc agcccgacgc cgccggcggc 901 cgcagccccg gccgagcagg cgccgcgggc caagggccgc ccgagacggt ccccagagag 961 ccaccggagg agcagctcac ctgagagacg gagccccggc tcgcccgtgt gcagagcgga 1021 caaggcaaaa tctcagcaag ttcggacctc tagtacaata aggcgaacct cctctttgga 1081 tacaataaca ggaccttacc tcacaggaca gtggccacgg gatcctcatg ttcactaccc 1141 ttcatgcatg aaagacaaag ctactcagac acctagctgt tgggcagaag agggtgcaga 1201 aaagaggtca catcagcgtt ctgcgtcatg ggggagtgct gatcaactaa aagagcagat 1261 cgccaaactg aggcagcaac tacaacgcag taaacagagt agtcgtcaca gtaaggagaa 1321 agatcgccag tcacctcttc atggcaacca tataacaatc agtcacactc aggctactgg 1381 atcaaggtca gttcctatgc cactgtcaaa tatatcagtg ccaaaatcat ctgtttcgcg 1441 tgtgccctgc aatgtagaag gaataagtcc tgaattagaa aaggtattca ttaaagaaaa 1501 taatgggaag gaagaagtat ccaagccgtt ggacatacca gatggtcgaa gagctccact 1561 tcctgctcat taccggagca gtagtactcg cagcattgac actcagactc cttctgtcca 1621 ggagcgcagc agtagctgca gcagtcattc accctgtgtc tccccttttt gtcccccgga 1681 atcccaggat ggtagccctt gctcaacaga agatttgctc tatgatcgtg ataaagacag 1741 tgggagtagc tcaccgttac ccaagtatgc ttcatctccc aaaccaaaca acagctacat 1801 gttcaaacgg gagcccccag agggatgtga gcgagtgaag gtctttgagg aaatggcgtc 1861 tcgtcagcct atctcggccc ctctcttttc atgtcctgac aaaaacaagg ttaatttcat 1921 cccaaccgga tcagctttct gtcctgtaaa acttctaggc cccctcttac ctgcttctga 1981 ccttatgctc aagaactctc ctaactctgg ccagagctca gctttggcaa ctctgaccgt 2041 tgagcagctc tcatcccggg tttcctttac gtctctttct gatgacacca gcacagcggg 2101 ctccatggag gcctctgtcc agcagccatc ccagcagcag cagctcctgc aggaactgca 2161 gggtgaggac cacatctctg ctcagaacta tgtgatcatc taaaaagggg gagctggcct 2221 ccaccctgtg ttccatggat tcggaacaag atttcagaca tctgcatgag tgacaaactt 2281 tctgaacacc accaccacca ataatactta tcagcatcat aaagtatctc ttaaacactg 2341 atcttggcag ggacggaact cctattcagc agtttttgtg gaaagcagta atgcttgcaa 2401 aacgtgtgtg tcattcagca ttttaagtgg agactatgca tttcatagta tatttgacag 2461 attagtactg tgtcctgtgt tttgttccag attcttcagt ataaataagc tctatatcaa 2521 aaagttgcct gtctaaatag aaaatgtctt gctgtgtttt gtcctatgga aaatactgta 2581 attcaggatt atgtttacaa ttgatccagg tgtttgtttc taacttctgt aatacataca 2641 atgcaaaaaa aaaaaaaaaa aatggccaca acagttgcac agtgcccacc ctatggccta 2701 gcttcaggta cttcagttga agtctaaact caggtaactt ggaatgtata tcatattggg 2761 atattaaata tttcacagct aaaaagctaa agagggaaca tcactctttt gcctttcctt 2821 attttatgca tttccctttc ctcattacat tccacattct tagaataaga agtgcattca 2881 atcctaggag aatgataatc ctggacatgg gtgaacatga ggagaaccag caaaatctgt 2941 ggtgtttgac atcactttgt catgtggtta caagtaaaac aactgttgca ttcactgttt 3001 caaaaaaaaa aaaaaaaaaa gaaaaaaaaa aaaaaaa //