LOCUS BC048960 4543 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1,
mRNA (cDNA clone MGC:57116 IMAGE:5260751), complete cds.
ACCESSION BC048960
VERSION BC048960.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4543)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4543)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 106 Row: h Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51702529.
FEATURES Location/Qualifiers
source 1..4543
/db_xref="H-InvDB:HIT000053342"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57116 IMAGE:5260751"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4543
/gene="YES1"
/gene_synonym="c-yes"
/gene_synonym="HsT441"
/gene_synonym="P61-YES"
/gene_synonym="Yes"
/db_xref="GeneID:7525"
/db_xref="HGNC:HGNC:12841"
/db_xref="MIM:164880"
CDS 218..1849
/gene="YES1"
/gene_synonym="c-yes"
/gene_synonym="HsT441"
/gene_synonym="P61-YES"
/gene_synonym="Yes"
/codon_start=1
/product="v-yes-1 Yamaguchi sarcoma viral oncogene homolog
1"
/protein_id="AAH48960.1"
/db_xref="GeneID:7525"
/db_xref="HGNC:HGNC:12841"
/db_xref="MIM:164880"
/translation="MGCIKSKENKSPAIKYRPENTPEPVSTSVSHYGAEPTTVSPCPS
SSAKGTAVNFSSLSMTPFGGSSGVTPFGGASSSFSVVPSSYPAGLTGGVTIFVALYDY
EARTTEDLSFKKGERFQIINNTEGDWWEARSIATGKNGYIPSNYVAPADSIQAEEWYF
GKMGRKDAERLLLNPGNQRGIFLVRESETTKGAYSLSIRDWDEIRGDNVKHYKIRKLD
NGGYYITTRAQFDTLQKLVKHYTEHADGLCHKLTTVCPTVKPQTQGLAKDAWEIPRES
LRLEVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVP
LYAVVSEEPIYIVTEFMSKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNY
IHRDLRAANILVGENLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT
IKSDVWSFGILQTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMNLC
WKKDPDERPTFEYIQSFLEDYFTATEPQYQPGENL"
BASE COUNT 1455 a 786 c 952 g 1350 t
ORIGIN
1 ggaggtggag agtgaggccg aggcgtgggg agcccgggaa ctccctcctc ctgaagtaac
61 gcgtcccggg ccggctctgc cgtcgttgct gccgccgggc gccccgggac gaggaggtgg
121 aggagggaga gggcccgcgg gcctcgcctc cgccctccgc cacctcgagc tgcggtagca
181 gcgactcatg agagcgcggc ggaggacaga tttgataatg ggctgcatta aaagtaaaga
241 aaacaaaagt ccagccatta aatacagacc tgaaaatact ccagagcctg tcagtacaag
301 tgtgagccat tatggagcag aacccactac agtgtcacca tgtccgtcat cttcagcaaa
361 gggaacagca gttaatttca gcagtctttc catgacacca tttggaggat cctcaggggt
421 aacgcctttt ggaggtgcat cttcctcatt ttcagtggtg ccaagttcat atcctgctgg
481 tttaacaggt ggtgttacta tatttgtggc cttatatgat tatgaagcta gaactacaga
541 agacctttca tttaagaagg gtgaaagatt tcaaataatt aacaatacgg aaggagattg
601 gtgggaagca agatcaatcg ctacaggaaa gaatggttat atcccgagca attatgtagc
661 gcctgcagat tccattcagg cagaagaatg gtattttggc aaaatgggga gaaaagatgc
721 tgaaagatta cttttgaatc ctggaaatca acgaggtatt ttcttagtaa gagagagtga
781 aacaactaaa ggtgcttatt ccctttctat tcgtgattgg gatgagataa ggggtgacaa
841 tgtgaaacac tacaaaatta ggaaacttga caatggtgga tactatatca caaccagagc
901 acaatttgat actctgcaga aattggtgaa acactacaca gaacatgctg atggtttatg
961 ccacaagttg acaactgtgt gtccaactgt gaaacctcag actcaaggtc tagcaaaaga
1021 tgcttgggaa atccctcgag aatctttgcg actagaggtt aaactaggac aaggatgttt
1081 cggcgaagtg tggatgggaa catggaatgg aaccacgaaa gtagcaatca aaacactaaa
1141 accaggtaca atgatgccag aagctttcct tcaagaagct cagataatga aaaaattaag
1201 acatgataaa cttgttccac tatatgctgt tgtttctgaa gaaccaattt acattgtcac
1261 tgaatttatg tcaaaaggaa gcttattaga tttccttaag gaaggagatg gaaagtattt
1321 gaagcttcca cagctggttg atatggctgc tcagattgct gatggtatgg catatattga
1381 aagaatgaac tatattcacc gagatcttcg ggctgctaat attcttgtag gagaaaatct
1441 tgtgtgcaaa atagcagact ttggtttagc aaggttaatt gaagacaatg aatacacagc
1501 aagacaaggt gcaaaatttc caatcaaatg gacagctcct gaagctgcac tgtatggtcg
1561 gtttacaata aagtctgatg tctggtcatt tggaattctg caaacagaac tagtaacaaa
1621 gggccgagtg ccatatccag gtatggtgaa ccgtgaagta ctagaacaag tggagcgagg
1681 atacaggatg ccgtgccctc agggctgtcc agaatccctc catgaattga tgaatctgtg
1741 ttggaagaag gaccctgatg aaagaccaac atttgaatat attcagtcct tcttggaaga
1801 ctacttcact gctacagagc cacagtacca gccaggagaa aatttataat tcaagtagcc
1861 tattttatat gcacaaatct gccaaaatat aaagaacttg tgtagatttt ctacaggaat
1921 caaaagaaga aaatcttctt tactctgcat gtttttaatg gtaaactgga atcccagata
1981 tggttgcaca aaaccacttt tttttcccca agtattaaac tctaatgtac caatgatgaa
2041 tttatcagcg tatttcaggg tccaaacaaa atagagctaa gatactgatg acagtgtggg
2101 tgacagcatg gtaatgaagg acagtgaggc tcctgcttat ttataaatca tttcctttct
2161 ttttttcccc aaagtcagaa ttgctcaaag aaaattattt attgttacag ataaaacttg
2221 agagataaaa agctatacca taataaaatc taaaattaag gaatatcatg ggaccaaata
2281 attccattcc agttttttaa agtttcttgc atttattatt ctcaaaagtt ttttctaagt
2341 taaacagtca gtatgcaatc ttaatatatg ctttcttttg catggacatg ggccaggttt
2401 ttcaaaagga atataaacag gatctcaaac ttgattaaat gttagaccac agaagtggaa
2461 tttgaaagta taatgcagta cattaatatt catgttcatg gaactgaaag aataagaact
2521 ttttcacttc agtccttttc tgaagagttt gacttagaat aatgaaggta actagaaagt
2581 gagttaatct tgtatgaggt tgcattgatt ttttaaggca atatataatt gaaactactg
2641 tccaatcaaa ggggaaatgt tttgatcttt agatagcatg caaagtaaga cccagcattt
2701 taaaagccct ttttaaaaac tagacttcgt actgtgagta ttgcttatat gtccttatgg
2761 ggatgggtgc cacaaataga aaatatgacc agatcaggga cttgaatgca cttttgctca
2821 tggtgaatat agatgaacag agaggaaaat gtatttaaaa gaaatacgag aaaagaaaat
2881 gtgaaagttt tacaagttag agggatggaa ggtaatgttt aatgttgatg tcatggagtg
2941 acagaatggc tttgctggca ctcagagctc ctcacttagc tatattctga gactttgaag
3001 agttataaag tataactata aaactaattt ttcttacaca ctaaatgggt atttgttcaa
3061 aataatgaag ttatggcttc acattcattg cagtgggata tggtttttat gtaaaacatt
3121 tttagaactc cagttttcaa atcatgtttg aatctacatt cacttttttt ttgttttctt
3181 ttttgagacg gagtctcgct ctgtcatcca ggctggagtg cagtggcacg atgtcggctt
3241 actgcaagct ccgcctccca ggttcacacc attctcctgc ctcagcctcc cgagtagctg
3301 ggactacagg tgcccaccac cacgcctggc tagttttttg tatttttagt agatacgcag
3361 tttcaccgtg ttagccagga tggtctcgat ctcctgacct cgtgatccgc ccgcctcggc
3421 ctcccaaagt gctgggatta caggcatgag ccaccgtgcc cggcctacat tcacttctaa
3481 agtctatgta atggtggtca ttttttccct tttagaatac attaaatggt tgatttgggg
3541 aggaaaactt attctgaata ttaacggtgg tgaaaagggg acagttttta ccctaaagtg
3601 caaaagtgaa acatacaaaa taagactaat tcttaagagt aactcagtaa tttaaaaata
3661 cagatttgaa tagcagcatt agtggtttga gtgtctagca aaggaaaaat tgatgaataa
3721 aatgaaggtc tggtgtatat gttttaaaat actctcatat agtcacactt taaattaagc
3781 cttatattag gcccctctat tttcaggata taattcttaa ctatcattat ttacctgatt
3841 ttaatcatca gattcgaaat tctgtgccat ggcatatatg ttcaaattca aaccattttt
3901 aaaatgtgac agatggactt catgcaagtt ggcagtggtt ctggtactaa aaattgtggt
3961 tgttttttct gtttacgtaa cctgcttagt attgacactc tctaccaaga gggtcttcct
4021 aagaagagtg ctgtcattat ttcctcttat caacaacttg tgacatgaga ttttttaagg
4081 gctttatgtg aactatgata ttgtaatttt tctaagcata ttcaaaaggg tgacaaaatt
4141 acgtttatgt actaaatcca atcaggaaag taaggcagga aaagttgatg gtattcatta
4201 ggttttaact gaatggagca gttccttata taataacaat tgtatagtag ggataaaaca
4261 ctaacttaat gtgtattcat tttaaattgt tctgtatttt taaattgcca agaaaaacaa
4321 ctttgtaaat ttggagatat tttccaacag cttttcgtct tcagtgtctt aatgtggaag
4381 ttaaccctta ccaaaaaagg aagttggcaa aaacagcctt ctagcacact tttttaaatg
4441 aataatggta gcctaaactt aatattttta taaagtattg taatattgtt ttgtggataa
4501 ttgaaataaa aagttctcat tgaatccaaa aaaaaaaaaa aaa
//