LOCUS BC044217 2098 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 (mitochondrial), mRNA (cDNA clone MGC:49912 IMAGE:5744956), complete cds. ACCESSION BC044217 VERSION BC044217.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2098) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2098) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 89 Row: g Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 50726975. FEATURES Location/Qualifiers source 1..2098 /db_xref="H-InvDB:HIT000052849" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:49912 IMAGE:5744956" /tissue_type="Brain, adult medulla" /clone_lib="NIH_MGC_119" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2098 /gene="HMGCS2" /db_xref="GeneID:3158" /db_xref="HGNC:HGNC:5008" /db_xref="MIM:600234" CDS 42..1568 /gene="HMGCS2" /codon_start=1 /product="3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 (mitochondrial)" /protein_id="AAH44217.1" /db_xref="GeneID:3158" /db_xref="HGNC:HGNC:5008" /db_xref="MIM:600234" /translation="MQRLLTPVKRILQLTRAVQETSLTPARLLPVAHQRFSTASAVPL AKTDTWPKDVGILALEVYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDI NSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGI DTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIAVYPSGNARPTGGAGAVAMLI GPKAPLALERGLRGTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKK IQNQWKQAGSDRPFTLDDLQYMIFHTPFCKMVQKSLARLMFNDFLSASSDTQTSLYKG LEAFGGLKLEDTYTNKDLDKALLKASQDMFDKKTKASLYLSTHNGNMYTSSLYGCLAS LLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSQDAAPGSPLDKLVSSTSDLPKRLA SRKCVSPEEFTEIMNQREQFYHKVNFSPPGDTNSLFPGTWYLERVDEQHRRKYARRPV " BASE COUNT 567 a 530 c 499 g 502 t ORIGIN 1 tgggtttctg aactgctggg tttctgcttg ctcctctgga gatgcagcgt ctgttgactc 61 cagtgaagcg cattctgcaa ctgacaagag cggtgcagga aacctccctc acacctgctc 121 gcctgctccc agtagcccac caaaggtttt ctacagcctc tgctgtcccc ctggccaaaa 181 cagatacttg gccaaaggac gtgggcatcc tggccctgga ggtctacttc ccagcccaat 241 atgtggacca aactgacctg gagaagtata acaatgtgga agcaggaaag tatacagtgg 301 gcttgggcca gacccgtatg ggcttctgct cagtccaaga ggacatcaac tccctgtgcc 361 tgacggtggt gcaacggctg atggagcgca tacagctccc atgggactct gtgggcaggc 421 tggaagtagg cactgagacc atcattgaca agtccaaagc tgtcaaaaca gtgctcatgg 481 aactcttcca ggattcaggc aatactgata ttgagggcat agataccacc aatgcctgct 541 acggtggtac tgcctccctc ttcaatgctg ccaactggat ggagtccagt tcctgggatg 601 gtcgttatgc catggtggtc tgtggagaca ttgccgtcta tcccagtggt aatgctcgtc 661 ccacaggtgg ggccggagct gtggctatgc tgattgggcc caaggcccct ctggccctgg 721 agcgagggct gaggggaacc catatggaga atgtgtatga cttctacaaa ccaaatttgg 781 cctcggagta cccaatagtg gatgggaagc tttccatcca gtgctacttg cgggccttgg 841 atcgatgtta cacatcatac cgtaaaaaaa tccagaatca gtggaagcaa gctggcagcg 901 atcgaccctt cacccttgac gatttacagt acatgatctt tcatacaccc ttttgcaaga 961 tggtccagaa gtctctggct cgcctgatgt tcaatgactt cctgtcagcc agcagtgaca 1021 cacaaaccag cttatataag gggctggagg ctttcggggg gctaaagctg gaagacacct 1081 acaccaacaa ggacctggat aaagcacttc taaaggcctc tcaggacatg ttcgacaaga 1141 aaaccaaggc ttccctttac ctctccactc acaatgggaa catgtacacc tcatccctgt 1201 acgggtgcct ggcctcgctt ctgtcccacc actctgccca agaactggct ggctccagga 1261 ttggtgcctt ctcttatggc tctggtttag cagcaagttt cttttcattt cgagtatccc 1321 aggatgctgc tccaggctct cccctggaca agttggtgtc cagcacatca gacctgccaa 1381 aacgcctagc ctcccgaaag tgtgtgtctc ctgaggagtt cacagaaata atgaaccaaa 1441 gagagcaatt ctaccataag gtgaatttct ccccacctgg tgacacaaac agccttttcc 1501 caggtacttg gtacctggag cgagtggacg agcagcatcg ccgaaagtat gcccggcgtc 1561 ccgtctaaag gtgttctgca gatccatgga aagcttcctg ggaaacgtat gctagcagag 1621 cttctccccg tgaatcatat ttttaagatc ccactcttag ctggtaaatg aatttgaatc 1681 gacatagtag ccccataagc atcagccctg tagagtgagg agccatctct agcgggccct 1741 tcattcctct ccatgctgca atcactgtcc tgggcttatg gtgctatgga ctaggggtcc 1801 tttgtgaaag agcaagatgg agcaatggag agaagacctc ttcctgaatc actggactcc 1861 agaaatgtgc atgcagatca gctgttgcct tcaagatcca gataaacttt cctgtcatgt 1921 gttagaactt tattattatt aatattgtta aacttctgtg ctgttcctgt gaatctccaa 1981 attttgtacc ttgttctaag ctaatatata gcaattaaaa agagagaaag aggaaaaaaa 2041 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa //