LOCUS       BC041164                2266 bp    mRNA    linear   HUM 09-JUN-2008
DEFINITION  Homo sapiens sphingomyelin phosphodiesterase 1, acid lysosomal,
            mRNA (cDNA clone MGC:48856 IMAGE:5762229), complete cds.
ACCESSION   BC041164
VERSION     BC041164.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2266)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2266)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Life Technologies, Inc.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 84 Row: m Column: 5
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 56117839.
FEATURES             Location/Qualifiers
     source          1..2266
                     /db_xref="H-InvDB:HIT000052529"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:48856 IMAGE:5762229"
                     /tissue_type="Lung, Spleen, fetal, pooled"
                     /clone_lib="NIH_MGC_122"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..2266
                     /gene="SMPD1"
                     /gene_synonym="ASM"
                     /gene_synonym="NPD"
                     /db_xref="GeneID:6609"
                     /db_xref="HGNC:HGNC:11120"
                     /db_xref="MIM:607608"
     CDS             97..1191
                     /gene="SMPD1"
                     /gene_synonym="ASM"
                     /gene_synonym="NPD"
                     /codon_start=1
                     /product="SMPD1 protein"
                     /protein_id="AAH41164.1"
                     /db_xref="GeneID:6609"
                     /db_xref="HGNC:HGNC:11120"
                     /db_xref="MIM:607608"
                     /translation="MPRYGASLRQSCPRSGREQGQDGTAGAPGLLWMGLALALALALA
                     LALSDSRVLWAPAEAHPLSPQGHPARLHRIVPRLRDVFGWGNLTCPICKGLFTAINLG
                     LKKEPNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLL
                     LGSTCGHWDIFSSWNISLPTVPKPPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTD
                     PDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWT
                     GDIPAHDVWHQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEG
                     NHSSRWLYEAMAKAWEPWLPAEALRTLRCI"
BASE COUNT          484 a          702 c          631 g          449 t
ORIGIN      
        1 ggtgtccccg gcgccgcccg gggccctgag ggctggctag ggtccaggcc gggggggacg
       61 ggacagacga accagccccg tgtaggaagc gcgacaatgc cccgctacgg agcgtcactc
      121 cgccagagct gccccaggtc cggccgggag cagggacaag acgggaccgc cggagccccc
      181 ggactccttt ggatgggcct ggcgctggcg ctggcgctgg cgctggcgct ggctctgtct
      241 gactctcggg ttctctgggc tccggcagag gctcaccctc tttctcccca aggccatcct
      301 gccaggttac atcgcatagt gccccggctc cgagatgtct ttgggtgggg gaacctcacc
      361 tgcccaatct gcaaaggtct attcaccgcc atcaacctcg ggctgaagaa ggaacccaat
      421 gtggctcgcg tgggctccgt ggccatcaag ctgtgcaatc tgctgaagat agcaccacct
      481 gccgtgtgcc aatccattgt ccacctcttt gaggatgaca tggtggaggt gtggagacgc
      541 tcagtgctga gcccatctga ggcctgtggc ctgctcctgg gctccacctg tgggcactgg
      601 gacattttct catcttggaa catctctttg cctactgtgc cgaagccgcc ccccaaaccc
      661 cctagccccc cagccccagg tgcccctgtc agccgcatcc tcttcctcac tgacctgcac
      721 tgggatcatg actacctgga gggcacggac cctgactgtg cagacccact gtgctgccgc
      781 cggggttctg gcctgccgcc cgcatcccgg ccaggtgccg gatactgggg cgaatacagc
      841 aagtgtgacc tgcccctgag gaccctggag agcctgttga gtgggctggg cccagccggc
      901 ccttttgata tggtgtactg gacaggagac atccccgcac atgatgtctg gcaccagact
      961 cgtcaggacc aactgcgggc cctgaccacc gtcacagcac ttgtgaggaa gttcctgggg
     1021 ccagtgccag tgtaccctgc tgtgggtaac catgaaagca cacctgtcaa tagcttccct
     1081 ccccccttca ttgagggcaa ccactcctcc cgctggctct atgaagcgat ggccaaggct
     1141 tgggagccct ggctgcctgc cgaagccctg cgcaccctca ggtgcatata attggccaca
     1201 ttcccccagg gcactgtctg aagagctgga gctggaatta ttaccgaatt gtagccaggt
     1261 atgagaacac cctggctgct cagttctttg gccacactca tgtggatgaa tttgaggtct
     1321 tctatgatga agagactctg agccggccgc tggctgtagc cttcctggca cccagtgcaa
     1381 ctacctacat cggccttaat cctggttacc gtgtgtacca aatagatgga aactactccg
     1441 ggagctctca cgtggtcctg gaccatgaga cctacatcct gaatctgacc caggcaaaca
     1501 taccgggagc cataccgcac tggcagcttc tctacagggc tcgagaaacc tatgggctgc
     1561 ccaacacact gcctaccgcc tggcacaacc tggtatatcg catgcggggc gacatgcaac
     1621 ttttccagac cttctggttt ctctaccata agggccaccc accctcggag ccctgtggca
     1681 cgccctgccg tctggctact ctttgtgccc agctctctgc ccgtgctgac agccctgctc
     1741 tgtgccgcca cctgatgcca gatgggagcc tcccagaggc ccagagcctg tggccaaggc
     1801 cactgttttg ctagggcccc agggcccaca tttgggaaag ttcttgatgt aggaaagggt
     1861 gaaaaagccc aaatgctgct gtggttcaac caggcaagat catccggtga aagaaccagt
     1921 ccctgggccc caaggatgcc ggggaaacag gaccttctcc tttcctggag ctggtttagc
     1981 tggatatggg agggggtttg gctgcctgtg cccaggagct agactgcctt gaggctgctg
     2041 tcctttcaca gccatggagt agaggcctaa gttgacactg ccctgggcag acaagacagg
     2101 agctgtcgcc ccaggcctgt gctgcccagc caggaaccct gtactgctgc tgcgacctga
     2161 tgctgccagt ctgttaaaat aaagataaga gacttggact ccaaaaaaaa aaaaaaaaaa
     2221 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//