LOCUS       BC039574                2238 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens vacuolar protein sorting 4 homolog B (S. cerevisiae),
            mRNA (cDNA clone MGC:48692 IMAGE:6042862), complete cds.
ACCESSION   BC039574
VERSION     BC039574.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2238)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2238)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (01-NOV-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 84 Row: n Column: 13
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 17865801.
FEATURES             Location/Qualifiers
     source          1..2238
                     /db_xref="H-InvDB:HIT000052208"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:48692 IMAGE:6042862"
                     /tissue_type="Testis, embryonal carcinoma"
                     /clone_lib="NIH_MGC_92"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..2238
                     /gene="VPS4B"
                     /gene_synonym="MIG1"
                     /gene_synonym="VPS4-2"
                     /db_xref="GeneID:9525"
                     /db_xref="HGNC:HGNC:10895"
                     /db_xref="MIM:609983"
     CDS             168..1502
                     /gene="VPS4B"
                     /gene_synonym="MIG1"
                     /gene_synonym="VPS4-2"
                     /codon_start=1
                     /product="vacuolar protein sorting 4 homolog B (S.
                     cerevisiae)"
                     /protein_id="AAH39574.1"
                     /db_xref="GeneID:9525"
                     /db_xref="HGNC:HGNC:10895"
                     /db_xref="MIM:609983"
                     /translation="MSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHV
                     VKYEAQGDKAKQSIRAKCTEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDS
                     DGEGESDDPEKKKLQNQLQGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLF
                     TGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKN
                     LFQLARENKPSIIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLG
                     ATNIPWVLDSAIRRRFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTD
                     GYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRADPNHLVDDLLTPCSPGDPGAI
                     EMTWMDVPGDKLLEPVVSMSDMLRSLSNTKPTVNEHDLLKLKKFTEDFGQEG"
BASE COUNT          710 a          420 c          492 g          616 t
ORIGIN      
        1 ggagagagtg ttgtctaaaa caagttccgg aagggaggct gcccttcgcg gtccgagaac
       61 caccggcctc cccagtttga gggctgttac cccgtgcgcg cttcgacgtt gctgctgttg
      121 gctctcctcg cccctcgttc ccttgggaac cgcctgggaa ctccgccatg tcatccactt
      181 cgcccaacct ccagaaagcg atagatctgg ctagcaaagc agcgcaagaa gacaaggctg
      241 ggaactacga agaagccctt cagctctatc agcatgctgt gcagtatttt cttcatgtcg
      301 ttaaatatga agcacagggt gataaagcca agcaaagtat cagggcaaag tgtacagaat
      361 atcttgatag agcagaaaaa ctaaaggagt acctgaaaaa taaagagaaa aaagcacaga
      421 agccagtgaa agaaggacag ccgagtccag cagatgagaa ggggaatgac agtgatgggg
      481 aaggagaatc tgatgatcct gaaaaaaaga aactacagaa tcaacttcaa ggtgccattg
      541 ttatagaacg accaaatgtg aaatggagtg acgttgctgg acttgaagga gccaaagaag
      601 cactgaaaga ggctgtgata ctgcctatta aatttcctca tctttttaca ggcaagagaa
      661 caccttggag gggaatccta ttatttgggc cgcctggaac aggaaagtcc tacttagcca
      721 aagctgtagc aacagaagcc aacaactcaa catttttttc aatatcttcc tctgatcttg
      781 tttctaagtg gctaggtgaa agtgaaaaac tggttaagaa tttattccaa cttgccagag
      841 agaacaagcc ctccattatc ttcattgatg aaattgattc tctctgtggt tcaagaagtg
      901 aaaatgaaag tgaagccgca cgtagaatta agacggagtt cctagtgcaa atgcaagggg
      961 ttggtgtaga caatgatgga attttggttc tgggagctac aaatataccc tgggttctgg
     1021 attctgccat taggcgaaga tttgagaaac gaatttatat tcccttgccg gaaccccatg
     1081 cccgagcagc aatgtttaaa ctgcacctag ggaccactca gaacagtctc acggaagcag
     1141 actttcggga acttgggagg aaaacagatg gttattcagg ggcagatata agtatcattg
     1201 tacgtgatgc ccttatgcag cctgttagga aagtacagtc agctactcat tttaaaaagg
     1261 ttcgcggacc ttcccgagct gatcctaacc atcttgtaga tgatctgcta acaccttgct
     1321 ctccaggtga ccctggtgcc attgaaatga catggatgga tgtccctgga gataaacttt
     1381 tggagccagt tgtttccatg tcggatatgt tgcggtcact atctaacaca aaacctacag
     1441 tcaatgaaca tgacttgttg aaattaaaga agtttacaga agattttggt caagaaggct
     1501 aagccaaaga caaggaagat gcttaccata tgtattcttt ctttcataga tatttttgtc
     1561 tatttggatc gcattaattg tttccagtaa aactctttta ccacagggaa atacacatct
     1621 cacttcagag ttccattagg ttttatattg tacttttcct ccattactta ttaaatactc
     1681 ctattaacaa aaggtacaaa ataacaggtt atgaggaaat gagcgatata tgaacggcat
     1741 aaaaacagaa attacccagt aaaaaggatg tcagaaattg acatacaaat atttacaatt
     1801 tttatgaatg gtggtctttg caaagagcat ttatattttc tttttttttt actaaaatga
     1861 tatagggttt attttatatt ttcaaaaaaa ttgttaaaca tcattcttat caatgtaaaa
     1921 tttacgttat taaaaaatta caaatgatag aatctttact cagggatggg caataaaaca
     1981 gcaaagagct ttgtgattgg gtttgaaaga ttttgaatta tagacagtgc tcttaatagt
     2041 ttttaataag ttgatatttt tttctgtgta gatttaaata atttctttaa aagcgtaagc
     2101 tttggctggg catggtggct tatgcctgta atcccagcac tttgggaggc tacgatgggt
     2161 ggatcacctg aggtcaggag ttcaagacca gtctggccaa catggtgaaa tgccgtctct
     2221 actaaaaaaa aaaaaaaa
//