LOCUS BC037958 1536 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens gastric intrinsic factor (vitamin B synthesis), mRNA
(cDNA clone MGC:46168 IMAGE:5759934), complete cds.
ACCESSION BC037958
VERSION BC037958.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1536)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1536)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: o Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32189397.
FEATURES Location/Qualifiers
source 1..1536
/db_xref="H-InvDB:HIT000051971"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46168 IMAGE:5759934"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1536
/gene="GIF"
/gene_synonym="IF"
/gene_synonym="IFMH"
/gene_synonym="INF"
/gene_synonym="TCN3"
/db_xref="GeneID:2694"
/db_xref="HGNC:HGNC:4268"
/db_xref="MIM:609342"
CDS 49..1302
/gene="GIF"
/gene_synonym="IF"
/gene_synonym="IFMH"
/gene_synonym="INF"
/gene_synonym="TCN3"
/codon_start=1
/product="gastric intrinsic factor (vitamin B synthesis)"
/protein_id="AAH37958.1"
/db_xref="GeneID:2694"
/db_xref="HGNC:HGNC:4268"
/db_xref="MIM:609342"
/translation="MAWFALYLLSLLWATAGTSTQTQSSCSVPSAQEPLVNGIQVLME
NSVTSSAYPNPSILIAMNLAGAYNLKAQKLLTYQLMSSDNNDLTIGQLGLTIMALTSS
CRDPGDKVSILQRQMENWAPSSPNAEASAFYGPSLAILALCQKNSEATLPIAVRFAKT
LLANSSPFNVDTGAMATLALTCMYNKIPVGSEEGYRSLFGQVLKDIVEKISMKIKDNG
IIGDIYSTGLAMQALSVTPEPSKKEWNCKKTTDMILNEIKQGKFHNPMSIAQILPSLK
GKTYLDVPQVTCSPDHEVQPTLPSNPGPGPTSASNITVIYTINNQLRGVELLFNETIN
VSVKSGSVLLVVLEEAQRKNPMFKFETTMTSWGLVVSSINNIAENVNHKTYWQFLSGV
TPLNEGVADYIPFNHEHITANFTQY"
BASE COUNT 459 a 401 c 319 g 357 t
ORIGIN
1 ttgcaaatcg cggtacctgt ggatgagaga catagacgag agagtgagat ggcctggttt
61 gccctctacc tcctgagcct tctctgggct acagctggga ctagtaccca gacccagagt
121 tcatgctccg ttccctcagc acaggagccc ttggtcaatg gaatacaagt actcatggag
181 aactcggtga cttcatcagc ctacccaaac cccagcatcc tgattgccat gaatctggcc
241 ggagcctaca acttgaaggc ccagaagctc ctgacttacc agctcatgtc cagcgacaac
301 aacgatctaa ccattgggca gctcggcctc accatcatgg ccctcacctc ctcctgccga
361 gaccctgggg ataaagtatc cattctacaa agacaaatgg agaactgggc accttccagc
421 cccaacgctg aagcatcagc cttctatggg cccagtctag cgatcttggc actgtgccag
481 aagaactctg aggcgacctt gccgatagcc gtccgctttg ccaagaccct gctggccaac
541 tcctctccct tcaatgtaga cacaggagca atggcaacct tggctctgac ctgtatgtac
601 aacaagatcc ctgtaggttc agaggaaggt tacagatccc tgtttggtca ggtactaaag
661 gatattgtgg agaaaatcag catgaagatc aaagataatg gcatcattgg agacatctac
721 agtactggcc tcgccatgca ggctctctct gtaacacctg agccatctaa aaaggaatgg
781 aactgcaaga agactacgga tatgatactc aatgagatta agcaggggaa attccacaac
841 cccatgtcca ttgctcaaat cctcccttcc ctgaaaggca agacatacct agatgtgccc
901 caggtcactt gtagtcctga tcatgaggta caaccaactc tacccagcaa ccctggccct
961 ggccccacct ctgcatctaa catcactgtc atatacacca taaataacca gctgaggggg
1021 gttgagctgc tcttcaacga gaccatcaat gttagtgtga aaagtgggtc agtgttactt
1081 gttgtcctag aggaagcaca gcgcaaaaat cctatgttca aatttgaaac cacaatgaca
1141 tcttggggcc ttgtcgtctc ttctatcaac aatatcgcgg aaaatgttaa tcacaagaca
1201 tactggcagt ttcttagtgg tgtaacacct ttgaatgaag gggttgctga ctacataccc
1261 ttcaaccacg agcacatcac agccaatttc acacagtact aacgaagagg tgggttcagc
1321 ttctatcaaa catctccaaa ggatgggtga aattttttcc acttcatttt aaatctatgc
1381 aaaaaagcga atgcctgtga tgctaccata ttcctggtaa aaacatggag aaccactatg
1441 tagaataaaa atgcaaagtt cactggagtc tcaacatcta tgactcatga aaataaaatt
1501 ttcatcttct caaaaaaaaa aaaaaaaaaa aaaaaa
//