LOCUS BC037777 2272 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens YY1 associated factor 2, mRNA (cDNA clone MGC:41856
IMAGE:5276663), complete cds.
ACCESSION BC037777
VERSION BC037777.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2272)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2272)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC037777.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 75 Row: j Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20544184.
FEATURES Location/Qualifiers
source 1..2272
/db_xref="H-InvDB:HIT000051950"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41856 IMAGE:5276663"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2272
/gene="YAF2"
/db_xref="GeneID:10138"
/db_xref="MIM:607534"
CDS 57..671
/gene="YAF2"
/codon_start=1
/product="YAF2 protein"
/protein_id="AAH37777.1"
/db_xref="GeneID:10138"
/db_xref="MIM:607534"
/translation="MGDKKSPTRPKRQPKPSSDEGYWDCSVCTFRNSAEAFKCMMCDV
RKGTSTRSTLFEVIVSASRTKEPLKFPISGRKPRPVSQLVAQQVTQQFVPPTQSKKEK
KDKVEKEKSEKETTSKKNSHKKTRPRLKNVDRSSAQHLEVTVGDLTVIITDFKEKTKS
PPASSAASADQHSQSGSSSDNTERGMSRSSSPRGEASSLNGESH"
BASE COUNT 783 a 377 c 399 g 713 t
ORIGIN
1 attgacaaac agagcggtcg cggcggcgac tctcggcgtg cggtgatagc caagccatgg
61 gagacaagaa gagccccacc aggccgaagc ggcagccgaa gccgtcctcg gatgagggtt
121 actgggactg tagcgtctgc accttccgga acagcgccga ggccttcaag tgcatgatgt
181 gcgatgtgcg gaagggcacc tccacccgat ccacattgtt tgaagttatt gtgagtgcct
241 cgaggaccaa ggaaccgttg aaatttccaa tttcaggaag gaaacctcga cctgtctccc
301 agttggttgc acagcaggtt actcagcagt ttgtgcctcc tacacagtca aagaaagaga
361 aaaaagataa agtagaaaaa gaaaaaagtg aaaaggaaac aactagcaaa aagaatagcc
421 ataagaaaac caggccaaga ttgaaaaatg tggatcggag tagtgctcag catttggaag
481 ttactgttgg agatctgaca gtcattatta cagactttaa ggagaaaaca aagtcaccgc
541 ctgcatctag tgctgcctct gcagatcaac acagtcaaag cggctctagc tctgataaca
601 cagagagagg aatgtccagg tcatcttcac ccagaggaga agcctcatca ttgaatggag
661 aatctcatta aagtttattt tctccaattt cttagtcact tctgtcctac catgcaaata
721 cacagattat gccaagaggt accacatttt catgacagat acattcatgc acaatccata
781 atttgagttt tacataaaat agaaatttgt tagaatttgt tagattttat tgcaatgatg
841 cctaccaaac atttccagac ttaacatttt ggtctctgca gttaagtgcc atgaaaatgt
901 ggttgaatta ttcattatgc agtgttattg gtaagtgtat tttcactttt agtttagtga
961 attctaacac ataattcttg aattctctac tattggcatg taacgaattt aaatttttta
1021 taacatagtg caagctgcct aaatatgtat tatttgagaa ttgtgaaaca gatagttata
1081 tgtatacaag tcaaagaaca acttaactat tgctgcaaca ggtttttctt aatggttatc
1141 ctcttaaata cacctgctgg tacttggtgt ggttaaatag gaaaattgtt attaaataaa
1201 gaatttgtat gaacctttgc caatgttttt gacacgtttt actaattatt gttcctgaat
1261 tatgtttctg gttttatcta ttttttgagg tttttttgtt tgcttatttt tcaaaacatt
1321 catttattgt aatgtttact agcggactag taaacaataa aacattgatt atttagcttt
1381 ataattcagg tttagtgcta ttgtcattga acactggtat tttctgtatc atataaaaca
1441 ttaaaattca aataattata agcatttggc aaaaacaaga gaaaagaaac ttgccatatt
1501 ttacaagctg caattttaga aaagctttaa cttaatgata gttttatcat tgttttcttg
1561 tcccaaactt atccagggcc atagaagtat gaatctaatt aaaacagaaa tgggaattat
1621 tgcacagaaa tgggaaataa ctaattttaa atcagtcaaa ttggcttctt attaaataca
1681 ataattctta tgaaaatcat agtaccctat tttcagacac agctgccagt ttacacattt
1741 ctcagtatcc tgaaaggaaa aaagtatagc cccacttata ctatgtaaaa ttaccaataa
1801 aatattttta tgactacaga ttttgcattt ttgtttacaa ctatttaaag agttttatgt
1861 tgtatttaga atttcaacct agaaaccaca cagtacttaa attctcctgg ggtctcctgc
1921 tttctcttaa ccatttgctt aatatatatc tacctaaagg agacttctga attgtaaatg
1981 aacttaaaaa tagaatgtgg atgcaaaata tcacataaga catcatgata acatttgaaa
2041 aaaaaataaa actgtagaca ctaacagttg tgatatttgg tggtttcatg tggtaatgta
2101 attttctgtt taattacagt actttttaca ggcacagtgg tactgtcttt tttgtaagat
2161 gctagttgtg aaatacaatt aattgcatac agtaaaagtc tgtgattaaa acatttatat
2221 acctcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaagaaaa aaaaaaaaaa aa
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