LOCUS BC036499 2244 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis), mRNA (cDNA clone MGC:43256 IMAGE:5264527), complete cds. ACCESSION BC036499 VERSION BC036499.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2244) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2244) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-AUG-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 73 Row: j Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40805828. FEATURES Location/Qualifiers source 1..2244 /db_xref="H-InvDB:HIT000094446" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:43256 IMAGE:5264527" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2244 /gene="COPS8" /gene_synonym="COP9" /gene_synonym="CSN8" /gene_synonym="MGC1297" /gene_synonym="SGN8" /db_xref="GeneID:10920" /db_xref="HGNC:HGNC:24335" CDS 659..1288 /gene="COPS8" /gene_synonym="COP9" /gene_synonym="CSN8" /gene_synonym="MGC1297" /gene_synonym="SGN8" /codon_start=1 /product="COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)" /protein_id="AAH36499.1" /db_xref="GeneID:10920" /db_xref="HGNC:HGNC:24335" /translation="MPVAVMAESAFSFKKLLDQCENQELEAPGGIATPPVYGQLLALY LLHNDMNNARYLWKRIPPAIKSANSELGGIWSVGQRIWQRDFPGIYTTINAHQWSETV QPIMEALRDATRRRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTR MVLPRKPVAGALDVSFNKFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN" BASE COUNT 589 a 501 c 540 g 614 t ORIGIN 1 agcggattcc ctctggctgc ggttccgaga atagcctgga aggaggcagg ggtcccggct 61 ggagaagcgt ggctccgggg tggggcgtgc agggctagcc cgggcggggg acgctgccca 121 acaagcaggt ttgcggagac tcacacctta gattctgagt ttttaagctt gtttcctcag 181 agcagggaac tcacgaacgt ttcgtgagca cctacggtat gcagggtacg gtgcggagcc 241 ctagcgtcac tgacgaccgg gacagccgag cagctgcagg atccgtcgtg ttccccagca 301 attttaatat ttaaaaattc gttactgttg ctgttacttg ttttctatgt attggatgtc 361 ttcgtgaaga accctcaaaa gtgcaacgaa ctcctccctg ccagagggcg gccgcgcgct 421 ctgagtacag cttcccgcgg agccggccag gtcctccagg gcaccgagaa agccggccag 481 aacggcggcg ccctatcccg gccgcagcga tgtctgacgg cgccccggaa ctgacggtct 541 ggtacgcagg ggcgctcggc ggcaacggcg gctttaaacg tcatcgcggg cgcgacgcct 601 gagggacagt ctggggtttg gctgtccgga cggtgcagcg gcgaggccgg ccgcgaagat 661 gccagtggcg gtgatggcgg aaagcgcctt tagtttcaaa aagttgctgg atcagtgcga 721 gaaccaggag ctcgaggccc ctggaggaat tgctacaccc ccagtgtatg gtcagcttct 781 agctttatat ttgctccata atgacatgaa taatgcaaga tatctttgga aaagaatacc 841 acctgctata aaatctgcaa attctgaact tgggggaatt tggtcagtag gacaaagaat 901 ctggcagaga gatttccctg ggatctatac aaccatcaac gctcaccagt ggtctgagac 961 ggtccagcca attatggaag cacttagaga tgcaacaagg agacgcgcct ttgccctggt 1021 ctctcaagcg tatacttcaa tcatcgccga tgattttgca gcctttgttg gacttcctgt 1081 agaagaggct gtgaaaggca tattagaaca aggatggcaa gctgattcca ccacaagaat 1141 ggttctgccc agaaagccag ttgcaggggc cctggatgtt tcctttaaca agtttattcc 1201 cttatcagag cctgctccag ttcccccaat acccaatgaa cagcagttag ccagactgac 1261 ggattatgtg gctttccttg aaaactgatt tatcactctg agttcaagat tcatcttcag 1321 aatcctgtat actgacaaac gtagaaatgt aaagtttgta ttttcaattt attggatggc 1381 ttaagcacct cagcattcct tactatgtga taaaatacat atagaatata agatatacta 1441 tatacatttt gtccataaac gttatgctga atagttgttg aaacagttct cattttgtag 1501 tatttaataa tctggatgga gcctgtcagt attacagtta gttttctagt gactcataaa 1561 ataagatttc ctgtttcatg tagaatagtg tttgtcaact gtcttttctc tgtcccagca 1621 catgccgtac tcttatatgt accattggtt gataattata atgattcatt tggacttgaa 1681 gaaagattgt ccccaggcac agtatctgaa tcactgggga ttatgattca ccctctttgg 1741 agaacatgct ctcttttcac cccccacctc ctgagagcca ctaatgtaag atacagaaac 1801 atagctgagg aacaaataga ccatttccat actaaaccag tttgttaact ttagattttt 1861 tccaatagtg tgagtatatc cattgctggc agtggagggc ttgccatgaa aatgcaactt 1921 atttaagaca tttatgagac atattaactt gtgctgtcgc cttttagaag gagaaactta 1981 agtgtggaat gcattatatg ggcaaagaag ctatgaagat acatgataca ctttgtacaa 2041 ctatcctgca gcccattggt tgcttatatt tatcgcttgg ctcaagttct gccctttgga 2101 gaaatactga gcaagtcttt cattctctgt gtgacagccc tctgaatatt tgaagttgtt 2161 tgttgtaact taaggttata acagccctta gttcatttac tctgcatttg ttcaataaat 2221 atttaaccga aaaaaaaaaa aaaa //