LOCUS BC033639 2468 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens cholinergic receptor, nicotinic, alpha 5, mRNA (cDNA clone MGC:45360 IMAGE:5501542), complete cds. ACCESSION BC033639 VERSION BC033639.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2468) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2468) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 69 Row: g Column: 12. FEATURES Location/Qualifiers source 1..2468 /db_xref="H-InvDB:HIT000041879" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:45360 IMAGE:5501542" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2468 /gene="CHRNA5" /db_xref="GeneID:1138" /db_xref="HGNC:HGNC:1959" /db_xref="MIM:118505" CDS 163..1569 /gene="CHRNA5" /codon_start=1 /product="cholinergic receptor, nicotinic, alpha 5" /protein_id="AAH33639.1" /db_xref="GeneID:1138" /db_xref="HGNC:HGNC:1959" /db_xref="MIM:118505" /translation="MAARGSGPRALRLLLLVQLVAGRCGLAGAAGGAQRGLSEPSSIA KHEDSLLKDLFQDYERWVRPVEHLNDKIKIKFGLAISQLVDVDEKNQLMTTNVWLKQE WIDVKLRWNPDDYGGIKVIRVPSDSVWTPDIVLFDNADGRFEGTSTKTVIRYNGTVTW TPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDIILEDQDVDKRDFFDNGEW EIVSATGSKGNRTDSCCWYPYVTYSFVIKRLPLFYTLFLIIPCIGLSFLTVLVFYLPS NEGEKICLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFTMIFVTLSIMVTVFA INIHHRSSSTHNAMAPLVRKIFLHTLPKLLCMRSHVDRYFTQKEETESGSGPKSSRNT LEAALDSIRYITRHIMKENDVREVVEDWKFIAQVLDRMFLWTFLFVSIVGSLGLFVPV IYKWANILIPVHIGNANK" BASE COUNT 717 a 495 c 548 g 708 t ORIGIN 1 ccacgcgtcc gggcgggagc tgtggcgcgg agcggcccct ctgctgcgtc tgccctcgtt 61 ttgtctcacg actcacactc agtgctccat tccccaagag ttcgcgttcc ccgcgcggcg 121 gtcgagaggc ggctgcccgc ggtcccgcgc gggcgcgggg cgatggcggc gcgggggtca 181 gggccccgcg cgctccgcct gctgctcttg gtccagctgg tcgcggggcg ctgcggtcta 241 gcgggcgcgg cgggcggcgc gcagagagga ttatctgaac cttcttctat tgcaaaacat 301 gaagatagtt tgcttaagga tttatttcaa gactacgaaa gatgggttcg tcctgtggaa 361 cacctgaatg acaaaataaa aataaaattt ggacttgcaa tatctcaatt ggtggatgtg 421 gatgagaaaa atcagttaat gacaacaaac gtctggttga aacaggaatg gatagatgta 481 aaattaagat ggaaccctga tgactatggt ggaataaaag ttatacgtgt tccttcagac 541 tctgtctgga caccagacat cgttttgttt gataatgcag atggacgttt tgaagggacc 601 agtacgaaaa cagtcatcag gtacaatggc actgtcacct ggactccacc ggcaaactac 661 aaaagttcct gtaccataga tgtcacgttt ttcccatttg accttcagaa ctgttccatg 721 aaatttggtt cttggactta tgatggatca caggttgata taattctaga ggaccaagat 781 gtagacaaga gagatttttt tgataatgga gaatgggaga ttgtgagtgc aacagggagc 841 aaaggaaaca gaaccgacag ctgttgctgg tatccgtatg tcacttactc atttgtaatc 901 aagcgcctgc ctctctttta taccttgttc cttataatac cctgtattgg gctctcattt 961 ttaactgtac ttgtcttcta tcttccttca aatgaaggtg aaaagatttg tctctgcact 1021 tcagtacttg tgtctttgac tgtcttcctt ctggttattg aagagatcat accatcatct 1081 tcaaaagtca tacctctaat tggagagtat ctggtattta ccatgatttt tgtgacactg 1141 tcaattatgg taaccgtctt cgctatcaac attcatcatc gttcttcctc aacacataat 1201 gccatggcgc ctttggtccg caagatattt cttcacacgc ttcccaaact gctttgcatg 1261 agaagtcatg tagacaggta cttcactcag aaagaggaaa ctgagagtgg tagtggacca 1321 aaatcttcta gaaacacatt ggaagctgcg ctcgattcta ttcgctacat tacaagacac 1381 atcatgaagg aaaatgatgt ccgtgaggtt gttgaagatt ggaaattcat agcccaggtt 1441 cttgatcgga tgtttctgtg gacttttctt ttcgtttcaa ttgttggatc tcttgggctt 1501 tttgttcctg ttatttataa atgggcaaat atattaatac cagttcatat tggaaatgca 1561 aataagtgaa gcctcccaag ggactgaagt atacatttag ttaacacaca tatatctgat 1621 ggcacctata aaattatgaa aatgtaagtt atgtgttaaa tttagtgcaa gctttaacag 1681 actaagttgc taacctcaat ttatgttaac agatgatcca tttgaacagt tggctgtatg 1741 actgaagtaa taactgatga gatacatttg atcttgtaaa aatagcaaaa tattatctga 1801 actggactag tgaaaaatct agtatttgta tcctggcaaa taatactaat ttataatcca 1861 cagtaaagtt catcctttga ctgtgctgga gaattccagt tgtatttgaa gactgatttt 1921 aaaacttttc tgcatttggt aaaggtatgt aaactttcct gtactcactg agtaacagct 1981 aatctttaat ataatattat actgctatat ttaaaaagct gactacttga tataattact 2041 taatgtgatg cttgatataa taattactta atgtggccgg gcacggtggc tcacacctgt 2101 aatcccagca ctttgggagg tcgaggtggg cgtatcacct gaggttggga gttcgagacc 2161 agcctgacca acgtggagaa accccgtctc tactaaaaat atgaaattag ccagggtggt 2221 ggtgcacacc tgtaatccca gctacctggg aggctgcggc aggagaatcg cttgaaccca 2281 ggtggcggag gttgcggtga gctgagatca cgccattgca ctccagcctg ggcaacaaga 2341 gcaaaactca gtctcaaata ataataataa caacaactta atgtgctgct gcttttccat 2401 aaccaacatt ttaaaaataa atgaaaaaca ggaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2461 aaaaaaaa //