LOCUS BC030007 4601 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens bromodomain containing 1, mRNA (cDNA clone MGC:26199
IMAGE:4826181), complete cds.
ACCESSION BC030007
VERSION BC030007.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4601)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4601)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: m Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11321641.
FEATURES Location/Qualifiers
source 1..4601
/db_xref="H-InvDB:HIT000259013"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26199 IMAGE:4826181"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4601
/gene="BRD1"
/gene_synonym="BRL"
/gene_synonym="BRPF1"
/gene_synonym="BRPF2"
/gene_synonym="DKFZP434B094"
/db_xref="GeneID:23774"
/db_xref="MIM:604589"
CDS 68..3637
/gene="BRD1"
/gene_synonym="BRL"
/gene_synonym="BRPF1"
/gene_synonym="BRPF2"
/gene_synonym="DKFZP434B094"
/codon_start=1
/product="BRD1 protein"
/protein_id="AAH30007.1"
/db_xref="GeneID:23774"
/db_xref="MIM:604589"
/translation="MRRKGRCHRGSAARHPSSPCSVKHSPTRETLTYAQAQGMVEIEI
EGRLHRISIFDPLEIILEDDLTAQEMSECNSNKENSERPPVCLRTKRHKNNRVKKKNE
ALPSAHGTPASASALPEPKVRIVEYSPPSAPRRPPVYYKFIEKSAEELDNEVEYDMDE
EDYAWLEIVNEKRKGDCVPAVSQSMFEFLMDRFEKESHCENQKQGEQQSLIDEDAVCC
ICMDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSRARPADCVLCHN
KGGAFKKTDDDRWGHVVCALWIPEVGFANTVFIEPIDGVRNIPPARWKLTCYLCKQKG
VGACIQCHKANCYTAFHVTCAQKAGLYMKMEPVKELTGGGTTFSVRKTAYCDVHTPPG
CTRRPLNIYGDVEMKNGVCRKESSVKTVRSTSKVRKKAKKAKKALAEPCAVLPTVCAP
YIPPQRLNRIANQVAIQRKKQFVERAHSYWLLKRLSRNGAPLLRRLQSSLQSQRSSQQ
RENDEEMKAAKEKLKYWQRLRHDLERARLLIELLRKREKLKREQVKVEQVAMELRLTP
LTVLLRSVLDQLQDKDPARIFAQPVSLKEVPDYLDHIKHPMDFATMRKRLEAQGYKNL
HEFEEDFDLIIDNCMKYNARDTVFYRAAVRLRDQGGVVLRQARREVDSIGLEEASGMH
LPERPAAAPRRPFSWEDVDRLLDPANRAHLGLEEQLRELLDMLDLTCAMKSSGSRSKR
AKLLKKEIALLRNKLSQQHSQPLPTGPGLEGFEEDGAALGPEAGEEGDKSPPKLEPSD
ALPLPSNSETNSEPPTLKPVELNPEQSKLFKRVTFDNESHSACTQSALVSGRPPEPTR
ASSGDVPAAAASAVAEPASDVNRRTSVLFCKSKSVSPPKSAKNTETQPTSPQLGTKTF
LSVVLPRLETLLQPRKRSRSTCGDSEVEEESPGKRLDAGLTNGFGGARSEQEPGGGLG
RKATPRRRCASESSISSSNSPLCDSSFNAPKCGRGKPALVRRHTLEDRSELISCIENG
NYAKAARIAAEVGQSSMWISTDAAASVLEPLKVVWAKCSGYPSYPALIIDPKMPRVPG
HHNGVTIPAPPLDVLKIGEHMQTKSDEKLFLVLFFDNKRSWQWLPKSKMVPLGIDETI
DKLKMMEGRNSSIRKAVRIAFDRAMNHLSRVHGEPTSDLSDID"
BASE COUNT 1127 a 1198 c 1313 g 963 t
ORIGIN
1 agcgggagtc cgcggccgcc gctgccgggc ccggagtccg cggcgccccg aaggtaatca
61 ttaccaaatg aggaggaaag gacgatgtca tcgaggctct gcagcgaggc atccttcttc
121 cccatgcagt gttaaacact cccctacgcg agaaacgctg acctacgctc aagctcaagg
181 gatggtagag atagaaattg aagggcgctt gcacaggatc agtatttttg atcccctgga
241 gatcatattg gaagatgacc tcactgctca agagatgagt gagtgcaaca gcaacaagga
301 aaacagcgag cggcctcctg tctgcttaag aactaagcgt cacaaaaaca acagagtcaa
361 aaagaaaaac gaggccctcc ccagcgccca cggcacgccg gcctcggcca gtgccctccc
421 ggagcccaag gtgcgcatcg tggagtacag ccctccgtcc gcccccagga ggcctcctgt
481 gtactacaag ttcatcgaga agtcggccga ggaactggac aacgaggtgg agtatgacat
541 ggacgaggag gactatgcct ggctggagat cgtcaatgag aagcgcaagg gcgactgcgt
601 ccccgccgtg tcgcagagca tgtttgagtt cctgatggac cgcttcgaga aggagtcgca
661 ctgcgagaac cagaagcagg gcgagcagca gtctctgatc gacgaggacg ccgtgtgctg
721 catctgcatg gacggggagt gtcagaacag caacgtgatc ctcttctgcg acatgtgcaa
781 cctggccgtg caccaggagt gctacggggt gccctacatc cccgagggcc agtggctctg
841 ccgccactgc ctgcagtcgc gggcccggcc cgccgactgt gtgctgtgcc acaacaaggg
901 tggtgccttc aaaaagacag atgacgaccg ctggggtcac gtggtgtgtg ccctgtggat
961 cccagaggtc ggctttgcca acacggtgtt catcgagccc atcgatgggg tgaggaacat
1021 ccctccagcc cggtggaaac tgacatgcta cctctgtaag cagaagggcg tgggtgcctg
1081 catccagtgc cacaaagcaa actgctacac agcattccat gtgacgtgtg cccagaaggc
1141 tggcctgtac atgaaaatgg agcccgtgaa ggaactgact ggcggtggca ccaccttctc
1201 cgtcagaaag accgcttact gtgatgtcca cacgcctcca ggctgcaccc ggaggcctct
1261 gaatatttac ggggatgtcg aaatgaaaaa tggcgtctgt cgaaaagaga gctcggttaa
1321 aacggtcagg tccacatcca aggtcaggaa gaaggcaaaa aaggctaaga aagctctggc
1381 tgagccctgc gcggtcctgc cgaccgtgtg cgctccttat attcccccgc agaggttaaa
1441 taggattgcg aatcaggtgg ccattcagcg gaagaagcag tttgtggagc gagcccacag
1501 ctactggctg ctcaagcggc tgtccaggaa cggggccccc ctgctgcggc ggctgcagtc
1561 cagcctgcag tctcagcgaa gctcacagca gagagaaaat gatgaggaga tgaaggctgc
1621 caaagagaag ctgaagtact ggcagcggct gcggcacgac ctggagcgcg ctcgcctgct
1681 gatcgagctg ctgcgcaagc gggagaagct caagcgtgag caggtgaagg tggagcaggt
1741 cgccatggag ctgcggctga ccccgctgac ggtgctgctg cgctcagtgc tggaccagct
1801 gcaagacaag gaccccgcca ggatatttgc gcagcccgtg agtctgaagg aggtaccaga
1861 ttatttggat cacattaaac atcccatgga ctttgccaca atgaggaaac ggttagaagc
1921 tcaagggtat aaaaacctcc atgagtttga ggaggatttt gatctcatta tagataactg
1981 catgaagtac aatgccaggg acaccgtgtt ctatagagcc gcggtgaggc tgcgcgatca
2041 gggaggtgtt gttctgaggc aggcccggcg cgaggtggac agcatcggct tggaagaggc
2101 ctcggggatg cacctgcctg agcggcctgc tgcggcaccg cggcggcctt tctcctggga
2161 agacgtggac aggttgctgg accccgccaa cagagcccac ctgggcctgg aggagcagct
2221 gagagagctg ctggacatgc tcgacctcac ctgcgctatg aagtccagcg gctcccggag
2281 caagcgggca aagctgctca aaaaggaaat tgcccttctc cgaaacaagc tgagccagca
2341 gcacagccag cccctgccca cggggccagg cttggaaggc ttcgaagagg acggagctgc
2401 gctggggccg gaggcgggcg aggaaggaga taaatctccc cctaaacttg aaccatcaga
2461 tgcattacct cttccttcaa actcggagac taattcagaa ccaccaaccc tcaaaccagt
2521 agaactcaac ccagagcaga gtaaactttt caaaagagtc acatttgata atgaatcaca
2581 tagcgcttgc actcagagcg cactggtaag cggacgccct ccagagccca cccgcgccag
2641 tagtggcgat gtgccggcgg cggcggcctc cgcggtggcg gagccagcaa gcgatgtaaa
2701 cagacgcact tctgttctct tctgcaaatc gaaaagtgta agccccccaa agtctgccaa
2761 gaacactgaa acccagccaa cttctcctca gctagggacc aaaacctttt tgtccgtagt
2821 ccttccgagg ttggagactc ttctgcagcc aaggaaaagg tcgcggagca catgcggaga
2881 ctccgaggtg gaggaggagt ccccaggaaa gcgcctggac gcaggtctca ccaacggctt
2941 tgggggtgcg aggagcgagc aggagccggg cggcggcctg gggaggaagg ccacaccccg
3001 acgacgctgt gcctccgagt ccagcatctc ctccagcaac agcccgctct gcgactcgag
3061 ctttaatgcg cccaaatgtg ggcggggcaa accggctctt gtgcgacggc acacgctgga
3121 ggaccgcagt gagctgatct cctgcatcga gaatgggaac tacgccaagg cggccaggat
3181 cgcagccgaa gtcggccaga gcagcatgtg gatctccact gatgccgccg cctcggtgct
3241 ggagcctctg aaggtggtgt gggccaagtg cagcggctac ccctcctacc cggcactgat
3301 catcgacccc aagatgcccc gtgtgcctgg ccaccacaac ggcgtcacca tcccggcccc
3361 acccctggac gtgctgaaga ttggggagca catgcagacc aagtctgatg agaagctgtt
3421 cctcgttctc ttttttgata ataagagaag ttggcagtgg cttcctaagt ccaaaatggt
3481 tccccttggt attgacgaaa ctatagacaa gttaaagatg atggaaggga ggaattccag
3541 catccggaag gccgtgcgga tcgcttttga ccgcgccatg aaccacctga gccgcgtcca
3601 cggggagccg accagcgacc tcagtgacat tgactgacgg cccggccgcc agcgcgggtc
3661 ttgtccatag tgttgataag ctgtacatgt ttgtatattg ttcaaaactt aacttattct
3721 gatttttagt tatagctctt taattctttt tccccgggga ggggggaggt tttatttcca
3781 agttttctag gaacccatct ccgtctgggc gctgtgagtg gggtgggcac gtccgggcag
3841 cccagtgcgt ctgtcgcacg tccccgggcc gtgctgctgg cgtcactttc tttgatatgt
3901 agctttttct taaagactct tgaatgttta atagttttgt aaatcatgct ctttacacag
3961 agtaccactt atttaataag acgggatgta aatttacaat gacaaatgtg tattttaaga
4021 aagaaaatga cattattttg aatggtactt tgtggaaaga ggggagaata aagttatgct
4081 gtgtacatca cttgcagatc accaaaaaca ctccgctgcc cgtgaccgcc ggtgggtgtg
4141 tccccgctcc cgtcgtcccg cccacctcaa accccgcagg tgtgcctccc agcggattat
4201 ttattgtaga aagtgtattc atttgcttta taatgaaaaa tacatttgca aaggtatatt
4261 gatatgcatt tttatacagg cacataaaaa ttcaacttgg cttgggagca gaatgcattg
4321 cattgtataa atgactctgg cctgtgtgta ctttgatttt ataacttgta atcttttgtt
4381 tacaatgagg ggctttctgt aacttgtttt aatttagaac actttggtag caatagaaac
4441 tttggataca tttttgtatg gtacctgtga tgtatataga attagtactt tatttttatt
4501 tttaagaggt aaagcattat gttggggaaa gtagggtggg tttccaaatt tgcatttttt
4561 atattaaaaa taaagtcaag atttggaaaa aaaaaaaaaa a
//