LOCUS BC029408 1010 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class
F, mRNA (cDNA clone MGC:32646 IMAGE:4664848), complete cds.
ACCESSION BC029408
VERSION BC029408.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1010)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1010)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 41 Row: h Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27894290.
FEATURES Location/Qualifiers
source 1..1010
/db_xref="H-InvDB:HIT000040750"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32646 IMAGE:4664848"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_61"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1010
/gene="PIGF"
/gene_synonym="MGC32646"
/gene_synonym="MGC33136"
/db_xref="GeneID:5281"
/db_xref="HGNC:HGNC:8962"
/db_xref="MIM:600153"
CDS 118..777
/gene="PIGF"
/gene_synonym="MGC32646"
/gene_synonym="MGC33136"
/codon_start=1
/product="phosphatidylinositol glycan anchor biosynthesis,
class F"
/protein_id="AAH29408.1"
/db_xref="GeneID:5281"
/db_xref="HGNC:HGNC:8962"
/db_xref="MIM:600153"
/translation="MKDNDIKRLLYTHLLCIFSIILSVFIPSLFLENFSILETHLTWL
CICSGFVTAVNLVLYLVVKPNTSSKRSSLSHKVTGFLKCCIYFLMSCFSFHVIFVLYG
APLIELALETFLFAVILSTFTTVPCLCLLGPNLKAWLRVFSRNGVTSIWENSLQITTI
SSFVGAWLGALPIPLDWERPWQVWPISCTLGATFGYVAGLVISPLWIYWNRKQLTYKN
N"
BASE COUNT 291 a 197 c 206 g 316 t
ORIGIN
1 acagccctgc gcctgcgcgt gggcctgggc cgcccgtcgt acctgatggt aggaggcagt
61 agttccccgc ttcccttccg cgggagggag agttagctag ccatccaaga aaacaccatg
121 aaagataacg atatcaagag actactgtat acccatcttt tatgcatatt ttcaattatc
181 ctaagtgtct tcattccatc actcttcttg gagaacttct caatattgga aacacacttg
241 acatggttgt gcatctgttc tggttttgta actgctgtca atctagtact atatttagta
301 gtgaaaccaa atacatcctc taaaagaagt tcattatcac acaaggtaac tggatttttg
361 aaatgctgta tctactttct tatgtcttgt ttctcctttc atgtaatttt tgttctgtat
421 ggagcaccac tgatagagtt ggcattggaa acatttttat ttgcagttat tttgtctact
481 tttactactg tgccttgctt atgtttgtta ggaccaaacc tcaaagcatg gctaagagtg
541 ttcagtagaa atggagttac atccatatgg gagaatagtc tccagatcac tacaatttct
601 agctttgtag gagcatggct tggagcactt cctattccac tggattggga aagaccatgg
661 caggtatggc ccatctcctg tacgcttgga gcgacctttg gctacgtggc tggccttgtt
721 atttcaccac tctggatata ctggaataga aagcaactta catacaagaa caattaactg
781 gagcaaaggg agatatttct ttgtgcagat tctgtaaggg ctgggcagaa atgtgtatgg
841 tcaaagccaa gcagttccat ttacagctct gttttttacg tagttacaac atgatgtgat
901 tgtagctttt taaactatga aacccctgag agattgtacc ttctagttga aataaagtat
961 ttataataga ttgtggctac aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//