LOCUS BC023505 1853 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens extracellular matrix protein 1, mRNA (cDNA clone MGC:3614 IMAGE:3614195), complete cds. ACCESSION BC023505 VERSION BC023505.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1853) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1853) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC023505.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 12 Row: h Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 12707564. FEATURES Location/Qualifiers source 1..1853 /db_xref="H-InvDB:HIT000050798" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3614 IMAGE:3614195" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1853 /gene="ECM1" /db_xref="GeneID:1893" /db_xref="HGNC:HGNC:3153" /db_xref="MIM:602201" CDS 126..1748 /gene="ECM1" /codon_start=1 /product="extracellular matrix protein 1" /protein_id="AAH23505.1" /db_xref="GeneID:1893" /db_xref="HGNC:HGNC:3153" /db_xref="MIM:602201" /translation="MGTTARAALVLTYLAVASAASEGGFTATGQRQLRPEHFQEVGYA APPSPPLSRSLPMDHPDSSQHGPPFEGQSQVQPPPSQEATPLQQEKLLPAQLPAEKEV GPPLPQEAVPLQKELPSLQHPNEQKEGMPAPFGDQSHPEPESWNAAQHCQQDRSQGGW GHRLDGFPPGRPSPDNLNQICLPNRQHVVYGPWNLPQSSYSHLTRQGETLNFLEIGYS RCCHCRSHTNRLECAKLVWEEAMSRFCEAEFSVKTRPHWCCTRQGEARFSCFQEEAPQ PHYQLRACPSHQPDISSGLELPFPPGVPTLDNIKNICHLRRFRSVPRNLPATDPLQRE LLALIQLEREFQRCCRQGNNHTCTWKAWEDTLDKYCDREYAVKTHHHLCCRHPPSPTR DECFARRAPYPNYDRDILTIDISRVTPNLMGHLCGNQRVLTKHKHIPGLIHNMTARCC DLPFPEQACCAEEEKLTFINDLCGPRRNIWRDPALCCYLSPGDEQVNCFNINYLRNVA LVSGDTENAKGQGEQGSTGGTNISSTSEPKEE" BASE COUNT 433 a 609 c 459 g 352 t ORIGIN 1 agaagagctg gtcctgaagc tcacaaccgt aacagccacc agacaagctt cagtggccgg 61 cccttcacat ccagacttgc ctgagaggac ccacctctga gtgtccagtg gtcagttgcc 121 ccaggatggg gaccacagcc agagcagcct tggtcttgac ctatttggct gttgcttctg 181 ctgcctctga gggaggcttc acggctacag gacagaggca gctgaggcca gagcactttc 241 aagaagttgg ctacgcagct cccccctccc cacccctatc ccgaagcctc cccatggatc 301 accctgactc ctctcagcat ggccctccct ttgagggaca gagtcaagtg cagccccctc 361 cctctcagga ggccacccct ctccaacagg aaaagctgct acctgcccaa ctccctgctg 421 aaaaggaagt gggtccccct ctccctcagg aagctgtccc cctccaaaaa gagctgccct 481 ctctccagca ccccaatgaa cagaaggaag gaatgccagc tccatttggg gaccagagcc 541 atccagaacc tgagtcctgg aatgcagccc agcactgcca acaggaccgg tcccaagggg 601 gctggggcca ccggctggat ggcttccccc ctgggcggcc ttctccagac aatctgaacc 661 aaatctgcct tcctaaccgt cagcatgtgg tatatggtcc ctggaaccta ccacagtcca 721 gctactccca cctcactcgc cagggtgaga ccctcaattt cctggagatt ggatattccc 781 gctgctgcca ctgccgcagc cacacaaacc gcctagagtg tgccaaactt gtgtgggagg 841 aagcaatgag ccgattctgt gaggccgagt tctcggtcaa gacccgaccc cactggtgct 901 gcacgcggca gggggaggct cggttctcct gcttccagga ggaagctccc cagccacact 961 accagctccg ggcctgcccc agccatcagc ctgatatttc ctcgggtctt gagctgcctt 1021 tccctcctgg ggtgcccaca ttggacaata tcaagaacat ctgccacctg aggcgcttcc 1081 gctctgtgcc acgcaacctg ccagctactg accccctaca aagggagctg ctggcactga 1141 tccagctgga gagggagttc cagcgctgct gccgccaggg gaacaatcac acctgtacat 1201 ggaaggcctg ggaggatacc cttgacaaat actgtgaccg ggagtatgct gtgaagaccc 1261 accaccactt gtgttgccgc caccctccca gccctactcg ggatgagtgc tttgcccgtc 1321 gggctcctta ccccaactat gaccgggaca tcttgaccat tgacatcagt cgagtcaccc 1381 ccaacctcat gggccacctc tgtggaaacc aaagagttct caccaagcat aaacatattc 1441 ctgggctgat ccacaacatg actgcccgct gctgtgacct gccatttcca gaacaggcct 1501 gctgtgcaga ggaggagaaa ttaaccttca tcaatgatct gtgtggtccc cgacgtaaca 1561 tctggcgaga ccctgccctc tgctgttacc tgagtcctgg ggatgaacag gtcaactgct 1621 tcaacatcaa ttatctgagg aacgtggctc tagtgtctgg agacactgag aacgccaagg 1681 gccaggggga gcagggctca actggaggaa caaatatcag ctccacctct gagcccaagg 1741 aagaatgagt caccccagag ccctagaggg tcagatgggg ggaaccccac cctgccccac 1801 ccatctgaac actcattaca ctaaacacct cttggaaaaa aaaaaaaaaa aaa //