LOCUS BC021825 2072 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens interferon (alpha, beta and omega) receptor 1, mRNA (cDNA clone MGC:24928 IMAGE:4932084), complete cds. ACCESSION BC021825 VERSION BC021825.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2072) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2072) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (18-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 29 Row: n Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 46488931. FEATURES Location/Qualifiers source 1..2072 /db_xref="H-InvDB:HIT000039290" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:24928 IMAGE:4932084" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2072 /gene="IFNAR1" /gene_synonym="AVP" /gene_synonym="IFN-alpha-REC" /gene_synonym="IFNBR" /gene_synonym="IFRC" /db_xref="GeneID:3454" /db_xref="HGNC:HGNC:5432" /db_xref="MIM:107450" CDS 80..1753 /gene="IFNAR1" /gene_synonym="AVP" /gene_synonym="IFN-alpha-REC" /gene_synonym="IFNBR" /gene_synonym="IFRC" /codon_start=1 /product="interferon (alpha, beta and omega) receptor 1" /protein_id="AAH21825.1" /db_xref="GeneID:3454" /db_xref="HGNC:HGNC:5432" /db_xref="MIM:107450" /translation="MMVVLLGATTLVLVAVAPWVLSAAAGGKNLKSPQKVEVDIIDDN FILRWNRSDESVGNVTFSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKL RIRAEKENTSSWYEVDSFTPFRKAQIGPPEVHLEAEDKAIVIHISPGTKDSVMWALDG LSFTYSLVIWKNSSGVEERIENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPV HCIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYK WKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLP PVFNIRSLSDSFHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTSNAERKIIEKKTDVT VPNLKPLTVYCVKARAHTMDEKLNKSSVFSDAVCEKTKPGNTSKIWLIVGICIALFAL PFVIYAAKVFLRCINYVFFPSLKPSSSIDEYFSEQPLKNLLLSTSEEQIEKCFIIENI STIATVEETNQTDEDHKKYSSQTSQDSGNYSNEDESESKTSEELQQDFV" BASE COUNT 692 a 395 c 419 g 566 t ORIGIN 1 cttaggacgg ggcgatggcg gctgagagga gctgcgcgtg cgcgaacatg taactggtgg 61 gatctgcggc ggctcccaga tgatggtcgt cctcctgggc gcgacgaccc tagtgctcgt 121 cgccgtggcg ccatgggtgt tgtccgcagc cgcaggtgga aaaaatctaa aatctcctca 181 aaaagtagag gtcgacatca tagatgacaa ctttatcctg aggtggaaca ggagcgatga 241 gtctgtcggg aatgtgactt tttcattcga ttatcaaaaa actgggatgg ataattggat 301 aaaattgtct gggtgtcaga atattactag taccaaatgc aacttttctt cactcaagct 361 gaatgtttat gaagaaatta aattgcgtat aagagcagaa aaagaaaaca cttcttcatg 421 gtatgaggtt gactcattta caccatttcg caaagctcag attggtcctc cagaagtaca 481 tttagaagct gaagataagg caatagtgat acacatctct cctggaacaa aagatagtgt 541 tatgtgggct ttggatggtt taagctttac atatagctta gttatctgga aaaactcttc 601 aggtgtagaa gaaaggattg aaaatattta ttccagacat aaaatttata aactctcacc 661 agagactact tattgtctaa aagttaaagc agcactactt acgtcatgga aaattggtgt 721 ctatagtcca gtacattgta taaagaccac agttgaaaat gaactacctc caccagaaaa 781 tatagaagtc agtgtccaaa atcagaacta tgttcttaaa tgggattata catatgcaaa 841 catgaccttt caagttcagt ggctccacgc ctttttaaaa aggaatcctg gaaaccattt 901 gtataaatgg aaacaaatac ctgactgtga aaatgtcaaa actacccagt gtgtctttcc 961 tcaaaacgtt ttccaaaaag gaatttacct tctccgcgta caagcatctg atggaaataa 1021 cacatctttt tggtctgaag agataaagtt tgatactgaa atacaagctt tcctacttcc 1081 tccagtcttt aacattagat cccttagtga ttcattccat atctatatcg gtgctccaaa 1141 acagtctgga aacacgcctg tgatccagga ttatccactg atttatgaaa ttattttttg 1201 ggaaaacact tcaaatgctg agagaaaaat tatcgagaaa aaaactgatg ttacagttcc 1261 taatttgaaa ccactgactg tatattgtgt gaaagccaga gcacacacca tggatgaaaa 1321 gctgaataaa agcagtgttt ttagtgacgc tgtatgtgag aaaacaaaac caggaaatac 1381 ctctaaaatt tggcttatag ttggaatttg tattgcatta tttgctctcc cgtttgtcat 1441 ttatgctgcg aaagtcttct tgagatgcat caattatgtc ttctttccat cacttaaacc 1501 ttcttccagt atagatgagt atttctctga acagccattg aagaatcttc tgctttcaac 1561 ttctgaggaa caaatcgaaa aatgtttcat aattgaaaat ataagcacaa ttgctacagt 1621 agaagaaact aatcaaactg atgaagatca taaaaaatac agttcccaaa ctagccaaga 1681 ttcaggaaat tattctaatg aagatgaaag cgaaagtaaa acaagtgaag aactacagca 1741 ggactttgta tgaccagaaa tgaactgtgt caagtataag gtttttcagc aggagttaca 1801 ctgggagcct gaggtcctca ccttcctctc agtaactaca gagaggacgt ttccctgttt 1861 agggaaagaa aaaacatctt cagatcatag gtcctaaaaa tacgggcaag ctcttaacta 1921 tttaaaaatg aaattacagg cccgggcacg gtggctcaca cctgtaatcc cagcactttg 1981 ggaggctgag gcaggcagat catgaggtca agagatcgag accagcctgg ccaacgtggt 2041 gaaaccccat ctctactaaa aaaaaaaaaa aa //