LOCUS BC020944 1532 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens actin-like 6B, mRNA (cDNA clone MGC:26485
IMAGE:4800261), complete cds.
ACCESSION BC020944
VERSION BC020944.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1532)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1532)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: i Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21536352.
FEATURES Location/Qualifiers
source 1..1532
/db_xref="H-InvDB:HIT000039036"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26485 IMAGE:4800261"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1532
/gene="ACTL6B"
/gene_synonym="BAF53B"
/db_xref="GeneID:51412"
/db_xref="HGNC:HGNC:160"
CDS 95..1375
/gene="ACTL6B"
/gene_synonym="BAF53B"
/codon_start=1
/product="actin-like 6B"
/protein_id="AAH20944.1"
/db_xref="GeneID:51412"
/db_xref="HGNC:HGNC:160"
/translation="MSGGVYGGDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLL
AAEEGGGLELEGDKEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDH
TYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANG
RSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPY
MIAAKEPVREGAPPNWKKKEKLPQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVA
AQMPTVHYEMPNGYNTDYGAERLRIPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCD
IDIRPGLYGSVIVTGGNTLLQGFTDRLNRELSQKTPPSMRLKLIASNSTMERKFSPWI
GGSILASLGTFQQMWISKQEYEEGGKQCVERKCP"
BASE COUNT 344 a 461 c 444 g 283 t
ORIGIN
1 gagtcccgcc ccgccaggga tcccgggagc tgtccggccg cctcggtgct gatcccgcca
61 ccgcccacgg gccgctagca gcgcagcggg cactatgagc gggggcgtct acggcggaga
121 tgaggtgggg gcgctggtct ttgacattgg ctccttctca gtccgcgctg ggtacgctgg
181 ggaggactgt cccaaggctg acttccccac cacagtgggg ctgctggccg cggaggaggg
241 gggcgggctg gagctggagg gggacaaaga gaagaaaggg aagatcttcc acatcgacac
301 caatgccctg cacgtgcctc gggatggagc ggaggtcatg tcgcccctca agaatggcat
361 gatcgaggac tgggagtgct tccgagccat cctggatcac acctacagca aacacgtcaa
421 gtctgagcca aacctgcacc cagtgctcat gtccgaggct ccgtggaaca cacgggccaa
481 gcgggagaag ctgacagagc tgatgttcga gcagtacaac attcctgcct tcttcttatg
541 caagacggct gtgctcaccg cctttgcaaa cgggcggtcc actggcctcg tgctggacag
601 tggagccacc cacaccacgg ccattccagt acatgacggc tacgttctgc agcaaggcat
661 cgtcaagtcc cctctggcag gggacttcat ctccatgcag tgccgggagc tgttccagga
721 gatggccatt gacatcatcc caccttacat gatcgcagcc aaggagcctg tccgggaggg
781 tgccccccca aactggaaga agaaggagaa gctaccccag gtctccaagt cctggcataa
841 ctacatgtgt aatgaggtga tccaggactt ccaggcctcc gtgctgcagg tctcagactc
901 cccctacgat gaacaggtgg ctgcacaaat gcccacagtg cactacgaga tgcccaatgg
961 ctacaataca gactacggcg ccgagcgact ccgcatccct gagggcctgt ttgatccctc
1021 gaacgtcaag ggcctgtcgg ggaacaccat gttgggtgtg ggccacgtgg tgaccaccag
1081 catcggcatg tgtgacattg atattcgccc gggcctgtac gggagtgtca ttgtcaccgg
1141 cgggaacaca ctgctgcagg gcttcactga caggctcaat cgagagcttt cccagaagac
1201 cccaccgagc atgcgactga aactcattgc cagcaacagc accatggagc gcaagttcag
1261 cccctggatc gggggttcca tcctggcctc actgggcact ttccagcaga tgtggatctc
1321 caagcaggaa tatgaggagg gcgggaagca gtgcgtggag cgaaagtgcc cctgatggca
1381 ctcctcccca cacacctgct cccaagctca gatggaagtc ccttaacccc catgccacat
1441 tgcccccctc ctcctttccc tcttgtcctc ataaatggtg atgtttctgg gttgaaagaa
1501 gtaaaaatgt tttaagaaaa aaaaaaaaaa aa
//