LOCUS       BC017166                2628 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens glypican 4, mRNA (cDNA clone MGC:9107 IMAGE:3922774),
            complete cds.
ACCESSION   BC017166
VERSION     BC017166.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2628)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2628)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC/DCTD/DTP
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 15 Row: p Column: 17
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 21614524.
FEATURES             Location/Qualifiers
     source          1..2628
                     /db_xref="H-InvDB:HIT000050670"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:9107 IMAGE:3922774"
                     /tissue_type="Skin, melanotic melanoma."
                     /clone_lib="NIH_MGC_72"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..2628
                     /gene="GPC4"
                     /gene_synonym="K-glypican"
                     /db_xref="GeneID:2239"
                     /db_xref="HGNC:HGNC:4452"
                     /db_xref="MIM:300168"
     CDS             507..2177
                     /gene="GPC4"
                     /gene_synonym="K-glypican"
                     /codon_start=1
                     /product="glypican 4"
                     /protein_id="AAH17166.1"
                     /db_xref="GeneID:2239"
                     /db_xref="HGNC:HGNC:4452"
                     /db_xref="MIM:300168"
                     /translation="MARFGLPALLCTLAVLSAALLAAELKSKSCSEVRRLYVSKGFNK
                     NDAPLHEINGDHLKICPQGSTCCSQEMEEKYSLQSKDDFKSVVSEQCNHLQAVFASRY
                     KKFDEFFKELLENAEKSLNDMFVKTYGHLYMQNSELFKDLFVELKRYYVVGNVNLEEM
                     LNDFWARLLERMFRLVNSQYHFTDEYLECVSKYTEQLKPFGDVPRKLKLQVTRAFVAA
                     RTFAQGLAVAGDVVSKVSVVNPTAQCTHALLKMIYCSHCRGLVTVKPCYNYCSNIMRG
                     CLANQGDLDFEWNNFIDAMLMVAERLEGPFNIESVMDPIDVKISDAIMNMQDNSVQVS
                     QKVFQGCGPPKPLPAGRISRSISESAFSARFRPHHPEERPTTAAGTSLDRLVTDVKEK
                     LKQAKKFWSSLPSNVCNDERMAAGNGNEDDCWNGKGKSRYLFAVTGNGLANQGNNPEV
                     QVDTSKPDILILRQIMALRVMTSKMKNAYNGNDVDFFDISDESSGEGSGSGCEYQQCP
                     SEFDYNATDHAGKSANEKADSAGVRPGAQAYLLTVFCILFLVMQREWR"
BASE COUNT          630 a          706 c          657 g          635 t
ORIGIN      
        1 ctgagaaggg cacagccgcg cggcggaggg cagagtcagc cgagccgagt ccagccggac
       61 gagcggacca gcgcagggca gcccaagcag cgcgcagcga acgcccgccg ccgcccacac
      121 cctctgcggt ccccgcggcg cctgccaccc ttccctcctt ccccgcgtcc ccgcctcgcc
      181 ggccagtcag cttgccgggt tcgctgcccc gcgaaacccc gaggtcacca gcccgcgcct
      241 ctgcttccct gggccgcgcg ccgcctccac gccctccttc tcccctggcc cggcgcctgg
      301 caccggggac cgttgcctga cgcgaggccc agctctactt ttcgccccgc gtctcctccg
      361 cctgctcgcc tcttccacca actccaactc cttctccctc cagctccact cgctagtccc
      421 cgactccgcc agccctcggc ccgctgccgt agcgccgctt cccgtccggt cccaaaggtg
      481 ggaacgcgtc cgccccggcc cgcaccatgg cacggttcgg cttgcccgcg cttctctgca
      541 ccctggcagt gctcagcgcc gcgctgctgg ctgccgagct caagtcgaaa agttgctcgg
      601 aagtgcgacg tctttacgtg tccaaaggct tcaacaagaa cgatgccccc ctccacgaga
      661 tcaacggtga tcatttgaag atctgtcccc agggttctac ctgctgctct caagagatgg
      721 aggagaagta cagcctgcaa agtaaagatg atttcaaaag tgtggtcagc gaacagtgca
      781 atcatttgca agctgtcttt gcttcacgtt acaagaagtt tgatgaattc ttcaaagaac
      841 tacttgaaaa tgcagagaaa tccctgaatg atatgtttgt gaagacatat ggccatttat
      901 acatgcaaaa ttctgagcta tttaaagatc tcttcgtaga gttgaaacgt tactacgtgg
      961 tgggaaatgt gaacctggaa gaaatgctaa atgacttctg ggctcgcctc ctggagcgga
     1021 tgttccgcct ggtgaactcc cagtaccact ttacagatga gtatctggaa tgtgtgagca
     1081 agtatacgga gcagctgaag cccttcggag atgtccctcg caaattgaag ctccaggtta
     1141 ctcgtgcttt tgtagcagcc cgtactttcg ctcaaggctt agcggttgcg ggagatgtcg
     1201 tgagcaaggt ctccgtggta aaccccacag cccagtgtac ccatgccctg ttgaagatga
     1261 tctactgctc ccactgccgg ggtctcgtga ctgtgaagcc atgttacaac tactgctcaa
     1321 acatcatgag aggctgtttg gccaaccaag gggatctcga ttttgaatgg aacaatttca
     1381 tagatgctat gctgatggtg gcagagaggc tagagggtcc tttcaacatt gaatcggtca
     1441 tggatcccat cgatgtgaag atttctgatg ctattatgaa catgcaggat aatagtgttc
     1501 aagtgtctca gaaggttttc cagggatgtg gaccccccaa gcccctccca gctggacgaa
     1561 tttctcgttc catctctgaa agtgccttca gtgctcgctt cagaccacat caccccgagg
     1621 aacgcccaac cacagcagct ggcactagtt tggaccgact ggttactgat gtcaaggaga
     1681 aactgaaaca ggccaagaaa ttctggtcct cccttccgag caacgtttgc aacgatgaga
     1741 ggatggctgc aggaaacggc aatgaggatg actgttggaa tgggaaaggc aaaagcaggt
     1801 acctgtttgc agtgacagga aatggattag ccaaccaggg caacaaccca gaggtccagg
     1861 ttgacaccag caaaccagac atactgatcc ttcgtcaaat catggctctt cgagtgatga
     1921 ccagcaagat gaagaatgca tacaatggga acgacgtgga cttctttgat atcagtgatg
     1981 aaagtagtgg agaaggaagt ggaagtggct gtgagtatca gcagtgccct tcagagtttg
     2041 actacaatgc cactgaccat gctgggaaga gtgccaatga gaaagccgac agtgctggtg
     2101 tccgtcctgg ggcacaggcc tacctcctca ctgtcttctg catcttgttc ctggttatgc
     2161 agagagagtg gagataattc tcaaactctg agaaaaagtg ttcatcaaaa agttaaaagg
     2221 caccagttat cacttttcta ccatcctagt gactttgctt tttaaatgaa tggacaacaa
     2281 tgtacagttt ttactatgtg gccactggtt taagaagtgc tgactttgtt ttctcattca
     2341 gttttgggag gaaaagggac tgtgcattga gttggttcct gctcccccaa accatgttaa
     2401 acgtggctaa cagtgtaggt acagaactat agttagttgt gcatttgtga ttttatcact
     2461 ctattatttg tttgtatgtt tttttctcat ttcgtttgtg ggtttttttt tccaactgtg
     2521 atctcgcctt gtttcttaca agcaaaccag ggtcccttct tggcacgtaa catgtacgta
     2581 tttctgaaat attaaatagc tgtacagaaa aaaaaaaaaa aaaaaaaa
//