LOCUS BC016925 2514 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens nuclear respiratory factor 1, mRNA (cDNA clone
MGC:21233 IMAGE:4397528), complete cds.
ACCESSION BC016925
VERSION BC016925.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2514)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2514)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 27 Row: d Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28882054.
FEATURES Location/Qualifiers
source 1..2514
/db_xref="H-InvDB:HIT000037750"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21233 IMAGE:4397528"
/tissue_type="Duodenum, adenocarcinoma"
/clone_lib="NIH_MGC_88"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2514
/gene="NRF1"
/gene_synonym="ALPHA-PAL"
/db_xref="GeneID:4899"
/db_xref="HGNC:HGNC:7996"
/db_xref="MIM:600879"
CDS 79..1647
/gene="NRF1"
/gene_synonym="ALPHA-PAL"
/codon_start=1
/product="NRF1 protein"
/protein_id="AAH16925.1"
/db_xref="GeneID:4899"
/db_xref="HGNC:HGNC:7996"
/db_xref="MIM:600879"
/translation="MEEHGVTQTEHMATIEAHAVAQQVQQVHVATYTEHSMLSADEDS
PSSPEDTSYDDSDILNSTAADEVTAHLAAAGPVGMAAAAAVATGKKRKRPHVFESNPS
IRKRQQTRLLRKLRATLDEYTTRVGQQAIVLCISPSKPNPVFKVFGAAPLENVVRKYK
SMILEDLESALAEHAPAPQEVNSELPPLTIDGIPVSVDKMTQAQLRAFIPEMLKYSTG
RGKPGWGKESCKPIWWPEDIPWANVRSDVRTEEQKQRVSWTQALRTIVKNCYKQHGRE
DLLYAFEDQQTQTQATATHSIAHLVPSQTVVQTFSNPDGTVSLIQVGTGATVATLADA
SELPTTVTVAQVNYSAVADGEVEQNWATLQGGEMTIQTTQASEATQAVASLAEAAVAA
SQEMQQGATVTMALNSEAAAHAVATLAEATLQGGGQIVLSGETAAAVGALTGVQDANG
LFMADRAGRKWILTDKATGLVQIPVSMYQTVVTSLAQGNGPVQVAMAPVTTRISDSAV
TMDGQAVEVVTLEQ"
BASE COUNT 675 a 611 c 651 g 577 t
ORIGIN
1 gaggctgcga ggagccggcg cggtcgcagt ctccacggcg caggcccacg gtagcgcagc
61 cgctctgagt agaacttcat ggaggaacac ggagtgaccc aaaccgaaca tatggctacc
121 atagaagcac atgcagtggc ccagcaagtg cagcaggtcc atgtggctac ttacaccgag
181 catagtatgc tgagtgctga tgaagactcg ccttcttctc ccgaggacac ctcttacgat
241 gactcagata tactcaactc cacagcagct gatgaggtga cagctcatct ggcagctgca
301 ggtcctgtgg gaatggccgc tgctgctgct gtggcaacag gaaagaaacg gaaacggcct
361 catgtatttg agtctaatcc atctatccgg aagaggcaac aaacacgttt gcttcggaaa
421 cttcgagcca cgttagatga atatactact cgtgtgggac agcaagctat tgtcctctgt
481 atctcaccct ccaaacctaa ccctgtcttt aaagtgtttg gtgcagcacc tttggagaat
541 gtggtgcgta agtacaagag catgatcctg gaagacctgg agtctgctct ggcagaacac
601 gcccctgcgc cacaggaggt taactcagaa ctgccgcctc tcaccatcga cggaattcca
661 gtctctgtgg acaaaatgac ccaggcccag cttcgggcat ttatcccaga gatgctcaag
721 tactctacag gtcggggaaa accaggctgg gggaaagaaa gctgcaagcc catctggtgg
781 cctgaagata tcccctgggc aaatgtccgg agtgatgtcc gcacagaaga gcaaaagcag
841 agggtttcat ggacccaggc actacggacc atagttaaaa actgttataa acagcatggg
901 cgggaagacc ttttgtatgc ctttgaagat cagcaaacgc aaacacaggc cacagccaca
961 catagtatag ctcatcttgt accatcacag actgtagtcc agacttttag taaccctgat
1021 ggcactgtct cacttatcca ggttggtacg ggggcaacag tagccacatt ggctgatgct
1081 tcagaattgc caaccacggt caccgttgcc caagtgaatt attctgccgt ggctgatgga
1141 gaggtggaac aaaattgggc cacgttacag ggaggtgaga tgaccatcca gacgacgcaa
1201 gcatcagagg ccacccaggc ggtggcatcg ttggcagagg ccgcagtggc agcttctcag
1261 gagatgcagc agggagctac agtcactatg gcgcttaaca gcgaagctgc cgcccatgct
1321 gtcgccaccc tggctgaggc caccttacaa ggtgggggac agatcgtctt gtctggggaa
1381 accgcagcag ccgtcggagc acttactgga gtccaagatg ctaatggcct ctttatggca
1441 gatcgtgcag gtcgcaagtg gatcctgact gacaaagcca caggcctggt ccagatccct
1501 gtgagcatgt accagactgt ggtgaccagc ctcgcccagg gcaacggacc agtgcaggtg
1561 gccatggccc ctgtgaccac caggatatca gacagcgcag tcaccatgga cggccaagct
1621 gtggaggtgg tgacattgga acagtgacat acagccatat tatggcatcg ttttctagtc
1681 tacttcaaaa ttttttacac gtttgcagag gtgcaatcaa atggaattaa gtctctcgac
1741 tttggaagga aagttttgtt aacctttttt tttttaaaag gaagaaagcg gattttggaa
1801 ttgcattttt taaagcacca ctcttgattt tctgggattg gtgaagaaac tgcattgtca
1861 atttcactgt cccaaaaaag ccaaattgtg gcaggacttc tttctgcgga aatgtgtgtg
1921 tatacttatg tgtgtgtatg tgtgagtgtg aatatatgta tatgtgtaca tatggacata
1981 cacatttaca tatatataaa gtatatatat acatatatat atatatatgt atgaaacccg
2041 catggaatta tctgtatgaa atcaaggtgc gctgtggaaa caataattca cccagtttag
2101 tgggtggtag ggtacgtggc cagacacagt cacccagttt ttgttcatac cagggtcatg
2161 cgttgagcta ctgacaaact caggcggagg tgaccatgcc cttcaccaaa gctgcctccc
2221 agtggccaca cagaactctc cctgctggac tcacctgagg aaagaggctc cagcatgggg
2281 tgggtcagag atgtgcttgc aaggtccagg gactgcgtgg tctgccagct gagatgctcc
2341 tcgggctggc ccaggtgctg accttgccac aggcagatga atgtcttgaa agctcccggg
2401 cctcagcctc ccatctcctc tccttcccag gaatccttga tctcatgact attaaaatgt
2461 tgctctggtt ttaaggtcaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
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