LOCUS BC013979 3236 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens gamma-glutamyl carboxylase, mRNA (cDNA clone MGC:19580
IMAGE:4129593), complete cds.
ACCESSION BC013979
VERSION BC013979.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3236)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3236)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC013979.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: m Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52851441.
FEATURES Location/Qualifiers
source 1..3236
/db_xref="H-InvDB:HIT000036442"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19580 IMAGE:4129593"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3236
/gene="GGCX"
/gene_synonym="VKCFD1"
/db_xref="GeneID:2677"
/db_xref="HGNC:HGNC:4247"
/db_xref="MIM:137167"
CDS 29..2305
/gene="GGCX"
/gene_synonym="VKCFD1"
/codon_start=1
/product="gamma-glutamyl carboxylase"
/protein_id="AAH13979.1"
/db_xref="GeneID:2677"
/db_xref="HGNC:HGNC:4247"
/db_xref="MIM:137167"
/translation="MAVSAGSARTSPSSDKVQKDKAELISGPRQDSRIGKLLGFEWTD
LSSWRRLVTLLNRPTDPASLAVFRFLFGFLMVLDIPQERGLSSLDRKYLDGLDVCRFP
LLDALRPLPLDWMYLVYTIMFLGALGMMLGLCYRISCVLFLLPYWYVFLLDKTSWNNH
SYLYGLLAFQLTFMDANHYWSVDGLLNAHRRNAHVPLWNYAVLRGQIFIVYFIAGVKK
LDADWVEGYSMEYLSRHWLFSPFKLLLSEELTSLLVVHWGGLLLDLSAGFLLFFDVSR
SIGLFFVSYFHCMNSQLFSIGMFSYVMLASSPLFCSPEWPRKLVSYCPRRLQQLLPLK
AAPQPSVSCVYKRSRGKSGQKPGLRHQLGAAFTLLYLLEQLFLPYSHFLTQGYNNWTN
GLYGYSWDMMVHSRSHQHVKITYRDGRTGELGYLNPGVFTQSRRWKDHADMLKQYATC
LSRLLPKYNVTEPQIYFDIWVSINDRFQQRIFDPRVDIVQAAWSPFQRTSWVQPLLMD
LSPWRAKLQEIKSSLDNHTEVVFIADFPGLHLENFVSEDLGNTSIQLLQGEVTVELVA
EQKNQTLREGEKMQLPAGEYHKVYTTSPSPSCYMYVYVNTTELALEQDLAYLQELKEK
VENGSETGPLPPELQPLLEGEVKGGPEPTPLVQTFLRRQQRLQEIERRRNTPFHERFF
RFLLRKLYVFRRSFLMTCISLRNLILGRPSLEQLAQEVTYANLRPFEAVGELNPSNTD
SSHSNPPESNPDPVHSEF"
BASE COUNT 829 a 788 c 811 g 808 t
ORIGIN
1 gtgacccacc tgcctcctcc gcagagcaat ggcggtgtct gccgggtccg cgcggacctc
61 gcccagctca gataaagtac agaaagacaa ggctgaactg atctcagggc ccaggcagga
121 cagccgaata gggaaactct tgggttttga gtggacagat ttgtccagtt ggcggaggct
181 ggtgaccctg ctgaatcgac caacggaccc tgcaagctta gctgtctttc gttttctttt
241 tgggttcttg atggtgctag acattcccca ggagcggggg ctcagctctc tggaccggaa
301 ataccttgat gggctggatg tgtgccgctt ccccttgctg gatgccctac gcccactgcc
361 acttgactgg atgtatcttg tctacaccat catgtttctg ggggcactgg gcatgatgct
421 gggcctgtgc taccggataa gctgtgtgtt attcctgctg ccatactggt atgtgtttct
481 cctggacaag acatcatgga acaaccactc ctatctgtat gggttgttgg cctttcagct
541 aacattcatg gatgcaaacc actactggtc tgtggacggt ctgctgaatg cccataggag
601 gaatgcccac gtgccccttt ggaactatgc agtgctccgt ggccagatct tcattgtgta
661 cttcattgcg ggtgtgaaaa agctggatgc agactgggtt gaaggctatt ccatggaata
721 tttgtcccgg cactggctct tcagtccctt caaactgctg ttgtctgagg agctgactag
781 cctgctggtc gtgcactggg gtgggctgct gcttgacctc tcagctggtt tcctgctctt
841 ttttgatgtc tcaagatcca ttggcctgtt ctttgtgtcc tacttccact gcatgaattc
901 ccagcttttc agcattggta tgttctccta cgtcatgctg gccagcagcc ctctcttctg
961 ctcccctgag tggcctcgga agctggtgtc ctactgcccc cgaaggttgc aacaactgtt
1021 gcccctcaag gcagcccctc agcccagtgt ttcctgtgtg tataagagga gccggggcaa
1081 aagtggccag aagccagggc tgcgccatca gctgggagct gccttcaccc tgctctacct
1141 cctggagcag ctattcctgc cctattctca ttttctcacc cagggctata acaactggac
1201 aaatgggctg tatggctatt cctgggacat gatggtgcac tcccgctccc accagcacgt
1261 gaagatcacc taccgtgatg gccgcactgg cgaactgggc taccttaacc ctggggtatt
1321 tacacagagt cggcgatgga aggatcatgc agacatgctg aagcaatatg ccacttgcct
1381 gagccgcctg cttcccaagt ataatgtcac tgagccccag atctactttg atatttgggt
1441 ctccatcaat gaccgcttcc agcagaggat ttttgaccct cgtgtggaca tcgtgcaggc
1501 cgcttggtca ccctttcagc gcacatcctg ggtgcaacca ctcttgatgg acctgtctcc
1561 ctggagggcc aagttacagg aaatcaagag cagcctagac aaccacactg aggtggtctt
1621 cattgcagat ttccctggac tgcacttgga gaattttgtg agtgaagacc tgggcaacac
1681 tagcatccag ctgctgcagg gggaagtgac tgtggagctt gtggcagaac agaagaacca
1741 gactcttcga gagggagaaa aaatgcagtt gcctgctggt gagtaccata aggtgtatac
1801 gacatcacct agcccttctt gctacatgta cgtctatgtc aacactacag agcttgcact
1861 ggagcaagac ctggcatatc tgcaagaatt aaaggaaaag gtggagaatg gaagtgaaac
1921 agggcctcta cccccagagc tgcagcctct gttggaaggg gaagtaaaag ggggccctga
1981 gccaacacct ctggttcaga cctttcttag acgccaacaa aggctccagg agattgaacg
2041 ccggcgaaat actcctttcc atgagcgatt cttccgcttc ttgttgcgaa agctctatgt
2101 ctttcgccgc agcttcctga tgacttgtat ctcacttcga aatctgatat taggccgtcc
2161 ttccctggag cagctggccc aggaggtgac ttatgcaaac ttgagaccct ttgaggcagt
2221 tggagaactg aatccctcaa acacggattc ttcacattct aatcctcctg agtcaaatcc
2281 tgatcctgtc cactcagagt tctgaagggg gccagatgtt gggtgcagat gtagaagcag
2341 ccagtcacag acccattcta tgcaatggac atttatttga aaaaaattct caaaagtttt
2401 tttttttttt ttgggggggc ggggttctaa agctgttttt aactccgaga ttacaactta
2461 gaggaaccaa ggaaataaag caaataagat ttaacaaccc aagattaaga ggccaggaag
2521 aggttagacg caatgtgaaa ctgtcctcct aggataaggt ttaaagtggc tttttggggg
2581 ctgggtgccg tggctcacgc ctgtaatccc agcattttgg gaggctgagg tgggcagatc
2641 acttgaggcc aggagttcga gaccagcctg gccaacatgg caaaacccct tctctactaa
2701 aaatacaaaa attagccaga cgtggtggtg ggtgcctgta atccaactac ccaggaggct
2761 gaggcatgag aatcgcttgg gcccaggagg tggaggttgc agtgagccga gatcgagcca
2821 ctgcactcct gggcaacaga gcaagacttc gtctcaaaat aaataaataa agtggctctt
2881 ggggaaaagc aatttaatgt accacgatga atagctaact gttcccaagt gtttgctatg
2941 tgcaacacac cgcgtgagca gtgttacctg cattattaca ttaggctgag aggtaaaata
3001 atttgcccga agacatacag ctagtgacga atggactgat ggtttgaact taacgtctat
3061 ttgacttaag gtcctgcacc ctgccacttg taattttcag aatcactgat aatctgaaat
3121 aatgcagctt aaaacatgtt ttcttaatta aaagtataaa aaaaaaaaaa aaaaaaaaaa
3181 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//