LOCUS BC013362 2641 bp mRNA linear HUM 04-AUG-2006
DEFINITION Homo sapiens runt-related transcription factor 3, mRNA (cDNA clone
MGC:16070 IMAGE:3615873), complete cds.
ACCESSION BC013362
VERSION BC013362.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2641)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2641)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC013362.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: a Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2641
/db_xref="H-InvDB:HIT000036232"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16070 IMAGE:3615873"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2641
/gene="RUNX3"
/gene_synonym="AML2"
/gene_synonym="MGC16070"
/gene_synonym="PEBP2aC"
/db_xref="GeneID:864"
/db_xref="HGNC:HGNC:10473"
/db_xref="MIM:600210"
CDS 247..1536
/gene="RUNX3"
/gene_synonym="AML2"
/gene_synonym="MGC16070"
/gene_synonym="PEBP2aC"
/codon_start=1
/product="RUNX3 protein"
/protein_id="AAH13362.1"
/db_xref="GeneID:864"
/db_xref="HGNC:HGNC:10473"
/db_xref="MIM:600210"
/translation="MASNSIFDSFPTYSPTFIRDPSTSRRFTPPSPAFPCGGGGGKMG
ENSGALSAQAAVGPGGRARPEVRSMVDVLADHAGELVRTDSPNFLCSVLPSHWRCNKT
LPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGR
GKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQKLEDQTKPFPDRFGDLERL
RMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESR
FPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQS
GPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMN
PSLGGQSDGVEADGSHSNSPTALSTPGRMDEAVWRPY"
BASE COUNT 541 a 939 c 711 g 450 t
ORIGIN
1 ggcggcccac tctgctctgt cagcttcgga gctcctccac cctggctgcc gaaagcccct
61 tcccgccatc taatgataca ctctgcatac gcttctgttg agaatttgtg gctagacatt
121 cctgtgggac cgggaatcca aattcttggt agctagagga aaaaaaaata aaacaacagc
181 caaccaagtg aatcccaacc caaccccctg aagggctgaa aattctcgcc ttcttcagag
241 cggggcatgg catcgaacag catcttcgac tccttcccga cctactcgcc gaccttcatc
301 cgcgacccaa gcaccagccg ccgcttcaca cctccctccc cggccttccc ctgcggcggc
361 ggcggcggca agatgggcga gaacagcggc gcgctgagcg cgcaggcggc cgtggggccc
421 ggagggcgcg cccggcccga ggtgcgctcg atggtggacg tgctggcgga ccacgcaggc
481 gagctcgtgc gcaccgacag ccccaacttc ctctgctccg tgctgccctc gcactggcgc
541 tgcaacaaga cgctgcccgt cgccttcaag gtggtggcat tgggggacgt gccggatggt
601 acggtggtga ctgtgatggc aggcaatgac gagaactact ccgctgagct gcgcaatgcc
661 tcggccgtca tgaagaacca ggtggccagg ttcaacgacc ttcgcttcgt gggccgcagt
721 gggcgaggga agagtttcac cctgaccatc actgtgttca ccaaccccac ccaagtggcg
781 acctaccacc gagccatcaa ggtgaccgtg gacggacccc gggagcccag acggcaccgg
841 cagaagctgg aggaccagac caagccgttc cctgaccgct ttggggacct ggaacggctg
901 cgcatgcggg tgacaccgag cacacccagc ccccgaggct cactcagcac cacaagccac
961 ttcagcagcc agccccagac cccaatccaa ggcacctcgg aactgaaccc attctccgac
1021 ccccgccagt ttgaccgctc cttccccacg ctgccaaccc tcacggagag ccgcttccca
1081 gaccccagga tgcattatcc cggggccatg tcagctgcct tcccctacag cgccacgccc
1141 tcgggcacga gcatcagcag cctcagcgtg gcgggcatgc cggccaccag ccgcttccac
1201 catacctacc tcccgccacc ctacccgggg gccccgcaga accagagcgg gcccttccag
1261 gccaacccgt ccccctacca cctctactac gggacatcct ctggctccta ccagttctcc
1321 atggtggccg gcagcagcag tgggggcgac cgctcaccta cccgcatgct ggcctcttgc
1381 accagcagcg ctgcctctgt cgccgccggc aacctcatga accccagcct gggcggccag
1441 agtgatggcg tggaggccga cggcagccac agcaactcac ccacggccct gagcacgcca
1501 ggccgcatgg atgaggccgt gtggcggccc tactgaccgc cctggtggac tcctcccgct
1561 ggaggcgggg accctaacaa ccttcaagac cagtgatggg ccggctccga ggctccgggc
1621 gggaatggga cctgcgctcc agggtggtct cggtcccagg gtggtcccag ctggtgggag
1681 cctctggctg catctgtgca gccacatcct tgtacagagg cataggttac cacccccacc
1741 ccggcccggg atactgcccc cggcccagat cctggccgtc tcatcccata cttctgtggg
1801 gaatcagcct cctgccaccc ccccggaagg acctcactgt ctccagctat gcccagtgct
1861 gcatgggacc catgtctcct gggacagagg ccatctctct tccagagaga ggcagcattg
1921 gcccacagga taagcctcag gccctgggaa acctcccgac ccctgcacct tcgttggagc
1981 ccctgcatcc cctgggtcca gccccctctg catttacaca gatttgagtc agaactggaa
2041 agtgtccccc acccccacca ccctcgagcg gggttcccct cattgtacag atggggcagg
2101 acccagcacg ctgctggcag agatggtttg agaacacatc caagccagtc cccccagccc
2161 agcttcccct ccgttcctaa ctgttggctt tcccccagcc gcacgggtcc caggccccag
2221 agaagatgag tctatggcat caggttctta aacccaggaa agcacctaca gaccggctcc
2281 tccatgcact ttaccagctc aacgcatcca ctctctgttc tcttggcagg gcgggggagg
2341 ggggatagga ggtccccttt cccctaggtg gtctcataat tccatttgtg gagagaacag
2401 gagggccaga tagataggtc ctagcagaag gcattgaggt gagggatcat tttgggtcag
2461 acatcaatgt ccctgtcccc cctgggtcca gccaagctgt gccccatccc ccaagcctcc
2521 tgggaggatc cagccaaatc ttgcgactcc tggcacacac ctgtctgtaa cctgttttgt
2581 gctctgaaag caaatagtcc tgagcaaaaa aaacaaaaaa aacaaaaaaa aaaaaaaaaa
2641 a
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