LOCUS       BC013325                1507 bp    mRNA    linear   HUM 04-OCT-2003
DEFINITION  Homo sapiens hepatitis A virus cellular receptor 1, mRNA (cDNA
            clone MGC:13455 IMAGE:3826378), complete cds.
ACCESSION   BC013325
VERSION     BC013325.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-AUG-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: CLONTECH Laboratories, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 19 Row: a Column: 7
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 6912407.
FEATURES             Location/Qualifiers
     source          1..1507
                     /db_xref="H-InvDB:HIT000036214"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:13455 IMAGE:3826378"
                     /tissue_type="Kidney, hypernephroma"
                     /clone_lib="NIH_MGC_58"
                     /lab_host="DH10B"
                     /note="Vector: pDNR-LIB"
     gene            1..1507
                     /gene="HAVCR1"
                     /gene_synonym="HAVCR"
                     /gene_synonym="HAVCR-1"
                     /gene_synonym="KIM-1"
                     /gene_synonym="KIM1"
                     /gene_synonym="TIM-1"
                     /gene_synonym="TIM1"
                     /gene_synonym="TIMD1"
                     /db_xref="GeneID:26762"
                     /db_xref="MIM:606518"
     CDS             169..1263
                     /gene="HAVCR1"
                     /gene_synonym="HAVCR"
                     /gene_synonym="HAVCR-1"
                     /gene_synonym="KIM-1"
                     /gene_synonym="KIM1"
                     /gene_synonym="TIM-1"
                     /gene_synonym="TIM1"
                     /gene_synonym="TIMD1"
                     /codon_start=1
                     /product="HAVCR1 protein"
                     /protein_id="AAH13325.1"
                     /db_xref="GeneID:26762"
                     /db_xref="MIM:606518"
                     /translation="MHPQVVILSLILHLADSVAGSVKVGGEAGPSVTLPCHYSGAVTS
                     MCWNRGSCSLFTCQNGIVWTNGTHVTYRKDTRYKLLGDLSRRDVSLTIENTAVSDSGV
                     YCCRVEHRGWFNDMKITVSLEIVPPKVTTTPIVTTVPTVTTVRTSTTVPTTTTVPMTT
                     VPTTTVPTTMSIPTTTTVLTTMTVSTTTSVPTTTSIPTTTSVPVTTTVSTFVPPMPLP
                     RQNHEPVATSPSSPQPAETHPTTLQGAIRREPTSSPLYSYTTDGNDTVTESSDGLWNN
                     NQTQLFLEHSLLTANTTKGIYAGVCISVLVLLALLGVIIAKKYFFKKEVQQLSVSFSS
                     LQIKALQNAVEKEVQAEDNIYIENSLYATD"
     misc_feature    259..489
                     /gene="HAVCR1"
                     /gene_synonym="HAVCR"
                     /gene_synonym="HAVCR-1"
                     /gene_synonym="KIM-1"
                     /gene_synonym="KIM1"
                     /gene_synonym="TIM-1"
                     /gene_synonym="TIM1"
                     /gene_synonym="TIMD1"
                     /note="IGv; Region: Immunoglobulin V-Type"
                     /db_xref="CDD:smart00406"
BASE COUNT          452 a          369 c          300 g          386 t
ORIGIN      
        1 gggcgttata tgtggtcttc tctcatttcc agcagagcag gctcatatga atcaaccaac
       61 tgggtgaaaa gataagttgc aatctgagat ttaagacttg atcagatacc atctggtgga
      121 gggtaccaac cagcctgtct gctcattttc cttcaggctg atcccataat gcatcctcaa
      181 gtggtcatct taagcctcat cctacatctg gcagattctg tagctggttc tgtaaaggtt
      241 ggtggagagg caggtccatc tgtcacacta ccctgccact acagtggagc tgtcacatcc
      301 atgtgctgga atagaggctc atgttctcta ttcacatgcc aaaatggcat tgtctggacc
      361 aatggaaccc acgtcaccta tcggaaggac acacgctata agctattggg ggacctttca
      421 agaagggatg tctctttgac catagaaaat acagctgtgt ctgacagtgg cgtatattgt
      481 tgccgtgttg agcaccgtgg gtggttcaat gacatgaaaa tcaccgtatc attggagatt
      541 gtgccaccca aggtcacgac tactccaatt gtcacaactg ttccaaccgt cacgactgtt
      601 cgaacgagca ccactgttcc aacgacaacg actgttccaa tgacgactgt tccaacgaca
      661 actgttccaa caacaatgag cattccaacg acaacgactg ttctgacgac aatgactgtt
      721 tcaacgacaa cgagcgttcc aacgacaacg agcattccaa caacaacaag tgttccagtg
      781 acaacaactg tctctacctt tgttcctcca atgcctttgc ccaggcagaa ccatgaacca
      841 gtagccactt caccatcttc acctcagcca gcagaaaccc accctacgac actgcaggga
      901 gcaataagga gagaacccac cagctcacca ttgtactctt acacaacaga tgggaatgac
      961 accgtgacag agtcttcaga tggcctttgg aataacaatc aaactcaact gttcctagaa
     1021 catagtctac tgacggccaa taccactaaa ggaatctatg ctggagtctg tatttctgtc
     1081 ttggtgcttc ttgctctttt gggtgtcatc attgccaaaa agtatttctt caaaaaggag
     1141 gttcaacaac taagtgtttc atttagcagc cttcaaatta aagctttgca aaatgcagtt
     1201 gaaaaggaag tccaagcaga agacaatatc tacattgaga atagtcttta tgccacggac
     1261 taagacccag tggtgctctt tgagagttta cgcccatgag tgcagaagac tgaacagaca
     1321 tcagcacatc agacgtcttt tagaccccaa gacaattttt ctgtttcagt ttcatctggc
     1381 attccaacat gtcagtgata ctgggtagag taactctctc actccaaact gtgtatagtc
     1441 aacctcatca ttaatgtagt cctaattttt tatgctgaaa aaaaaaaaaa aaaaaaaaaa
     1501 aaaaaaa
//