LOCUS BC011953 1631 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens paired box 6, mRNA (cDNA clone MGC:17209 IMAGE:3880468), complete cds. ACCESSION BC011953 VERSION BC011953.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1631) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1631) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP/Gazdar cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 21 Row: m Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4505614. FEATURES Location/Qualifiers source 1..1631 /db_xref="H-InvDB:HIT000035562" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17209 IMAGE:3880468" /tissue_type="Lung, large cell carcinoma" /clone_lib="NIH_MGC_68" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1631 /gene="PAX6" /gene_synonym="AN" /gene_synonym="D11S812E" /gene_synonym="MGDA" /gene_synonym="WAGR" /db_xref="GeneID:5080" /db_xref="HGNC:HGNC:8620" /db_xref="MIM:607108" CDS 342..1610 /gene="PAX6" /gene_synonym="AN" /gene_synonym="D11S812E" /gene_synonym="MGDA" /gene_synonym="WAGR" /codon_start=1 /product="paired box 6" /protein_id="AAH11953.1" /db_xref="GeneID:5080" /db_xref="HGNC:HGNC:8620" /db_xref="MIM:607108" /translation="MQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISR ILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEI RDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRP GWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFT QEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR QASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSMLGRTDTALTNTYSALPPMPS FTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPPHMQTHMNSQPMGTSGTT STGLISPGVSVPVQVPGSEPDMSQYWPRLQ" BASE COUNT 495 a 437 c 393 g 306 t ORIGIN 1 gttttgctgg aggatgatga cagaggaatc tgagaattgc tctcacacac caacccagca 61 acatccgtgg agaaaactct caccagcaac tcctttaaaa caccgtcatt tcaaaccatt 121 gtggtcttca agcaacaaca gcagcacaaa aaaccccaac caaacaaaac tcttgacaga 181 agctgtgaca accagaaagg atgcctcata aagggggaag actttaacta ggggcgcgca 241 gatgtgtgag gccttttatt gtgagagtgg acagacatcc gagatttcag agccccatat 301 tcgagccccg tggaatcccg cggcccccag ccagagccag catgcagaac agtcacagcg 361 gagtgaatca gctcggtggt gtctttgtca acgggcggcc actgccggac tccacccggc 421 agaagattgt agagctagct cacagcgggg cccggccgtg cgacatttcc cgaattctgc 481 aggtgtccaa cggatgtgtg agtaaaattc tgggcaggta ttacgagact ggctccatca 541 gacccagggc aatcggtggt agtaaaccga gagtagcgac tccagaagtt gtaagcaaaa 601 tagcccagta taagcgggag tgcccgtcca tctttgcttg ggaaatccga gacagattac 661 tgtccgaggg ggtctgtacc aacgataaca taccaagcgt gtcatcaata aacagagttc 721 ttcgcaacct ggctagcgaa aagcaacaga tgggcgcaga cggcatgtat gataaactaa 781 ggatgttgaa cgggcagacc ggaagctggg gcacccgccc tggttggtat ccggggactt 841 cggtgccagg gcaacctacg caagatggct gccagcaaca ggaaggaggg ggagagaata 901 ccaactccat cagttccaac ggagaagatt cagatgaggc tcaaatgcga cttcagctga 961 agcggaagct gcaaagaaat agaacatcct ttacccaaga gcaaattgag gccctggaga 1021 aagagtttga gagaacccat tatccagatg tgtttgcccg agaaagacta gcagccaaaa 1081 tagatctacc tgaagcaaga atacaggtat ggttttctaa tcgaagggcc aaatggagaa 1141 gagaagaaaa actgaggaat cagagaagac aggccagcaa cacacctagt catattccta 1201 tcagcagtag tttcagcacc agtgtctacc aaccaattcc acaacccacc acaccggttt 1261 cctccttcac atctggctcc atgttgggcc gaacagacac agccctcaca aacacctaca 1321 gcgctctgcc gcctatgccc agcttcacca tggcaaataa cctgcctatg caacccccag 1381 tccccagcca gacctcctca tactcctgca tgctgcccac cagcccttcg gtgaatgggc 1441 ggagttatga tacctacacc cccccacata tgcagacaca catgaacagt cagccaatgg 1501 gcacctcggg caccacttca acaggactca tttcccctgg tgtgtcagtt ccagttcaag 1561 ttcccggaag tgaacctgat atgtctcaat actggccaag attacagtaa aaaaaaaaaa 1621 aaaaaaaaaa a //