LOCUS BC011564 1555 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nuclear receptor subfamily 0, group B, member 1, mRNA
(cDNA clone MGC:20161 IMAGE:4637694), complete cds.
ACCESSION BC011564
VERSION BC011564.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1555)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1555)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: k Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 49574584.
FEATURES Location/Qualifiers
source 1..1555
/db_xref="H-InvDB:HIT000035293"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20161 IMAGE:4637694"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1555
/gene="NR0B1"
/gene_synonym="AHCH"
/gene_synonym="AHX"
/gene_synonym="DAX-1"
/gene_synonym="DAX1"
/gene_synonym="GTD"
/gene_synonym="HHG"
/gene_synonym="NROB1"
/db_xref="GeneID:190"
/db_xref="HGNC:HGNC:7960"
/db_xref="MIM:300473"
CDS 13..1425
/gene="NR0B1"
/gene_synonym="AHCH"
/gene_synonym="AHX"
/gene_synonym="DAX-1"
/gene_synonym="DAX1"
/gene_synonym="GTD"
/gene_synonym="HHG"
/gene_synonym="NROB1"
/codon_start=1
/product="nuclear receptor subfamily 0, group B, member 1"
/protein_id="AAH11564.1"
/db_xref="GeneID:190"
/db_xref="HGNC:HGNC:7960"
/db_xref="MIM:300473"
/translation="MAGENHQWQGSILYNMLMSAKQTRAAPEAPETRLVDQCWGCSCG
DEPGVGREGLLGGRNVALLYRCCFCGKDHPRQGSILYSMLTSAKQTYAAPKAPEATLG
PCWGCSCGSDPGVGRAGLPGGRPVALLYRCCFCGEDHPRQGSILYSLLTSSKQTHVAP
AAPEARPGGAWWDRSYFAQRPGGKEALPGGRATALLYRCCFCGEDHPQQGSTLYCVPT
STNQAQAAPEERPRAPWWDTSSGALRPVALKSPQVVCEAASAGLLKTLRFVKYLPCFQ
VLPLDQQLVLVRNCWASLLMLELAQDRLQFETVEVSEPSMLQKILTTRRRETGGNEPL
PVPTLQHHLAPPAEARKVPSASQVQAIKCFLSKCWSLNISTKEYAYLKGTVLFNPDVP
GLQCVKYIQGLQWGTQQILSEHTRMTHQGPHDRFIELNSTLFLLRFINANVIAELFFR
PIIGTVSMDDMMLEMLCTKI"
BASE COUNT 332 a 452 c 492 g 279 t
ORIGIN
1 gcgccgcggg ccatggcggg cgagaaccac cagtggcagg gcagcatcct ctacaacatg
61 cttatgagcg cgaagcaaac gcgcgcggct cctgaggctc cagagacgcg gctggtggat
121 cagtgctggg gctgttcgtg cggcgatgag cccggggtgg gcagagaggg gctgctgggc
181 gggcggaacg tggcgctcct gtaccgctgc tgcttttgcg gtaaagacca cccacggcag
241 ggcagcatcc tctacagcat gctgacgagc gcaaagcaaa cgtacgcggc accgaaggcg
301 cccgaggcga cgctgggtcc gtgctggggc tgttcgtgcg gctctgatcc cggggtgggc
361 agagcggggc ttccgggtgg gcggcccgtg gcactcctgt accgctgctg cttttgtggt
421 gaagaccacc cgcggcaggg cagcatcctc tacagcttgc tcactagctc aaagcaaacg
481 cacgtggctc cggcagcgcc cgaggcacgg ccagggggcg cgtggtggga ccgctcctac
541 ttcgcgcaga ggccaggggg taaagaggcg ctaccaggcg ggcgggccac ggcgcttctg
601 taccgctgct gcttttgcgg tgaagaccac ccgcagcagg gcagcaccct ctactgcgtg
661 cccacgagca caaatcaagc gcaggcggct ccggaggagc ggccgagggc cccctggtgg
721 gacacctcct ctggtgcgct gcggccggtg gcgctcaaga gtccacaggt ggtctgcgag
781 gcagcctcag cgggcctgtt gaagacgctg cgcttcgtca agtacttgcc ctgcttccag
841 gtgctgcccc tggaccagca gctggtgctg gtgcgcaact gctgggcgtc cctgctcatg
901 cttgagctgg cccaggaccg cttgcagttc gagactgtgg aagtctcgga gcccagcatg
961 ctgcagaaga tcctcaccac caggcggcgg gagaccgggg gcaacgagcc actgcccgtg
1021 cccacgctgc agcaccattt ggcaccgccg gcggaggcca ggaaggtgcc ctccgcctcc
1081 caggtccaag ccatcaagtg ctttctttcc aaatgctgga gtctgaacat cagtaccaag
1141 gagtacgcct acctcaaggg gaccgtgctc tttaacccgg acgtgccggg cctgcagtgc
1201 gtgaagtaca ttcagggact ccagtgggga actcagcaaa tactcagtga acacaccagg
1261 atgacgcacc aagggcccca tgacagattc atcgaactta atagtaccct tttcctgctg
1321 agattcatca atgccaatgt cattgctgaa ctgttcttca ggcccatcat cggcacagtc
1381 agcatggatg atatgatgct ggaaatgctc tgtacaaaga tataaagtca tgtgggccac
1441 acaagtgcag tagtgcagtt caccatgagg gaagaataaa gagctgtggg caaaagagtg
1501 taaaatattt taaaataaac tttcttaata tttttaaaaa aaaaaaaaaa aaaaa
//