LOCUS BC011559 1943 bp mRNA linear HUM 17-NOV-2006 DEFINITION Homo sapiens SMAD family member 9, mRNA (cDNA clone MGC:20039 IMAGE:4558912), complete cds. ACCESSION BC011559 VERSION BC011559.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1943) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1943) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 29 Row: e Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21361270. FEATURES Location/Qualifiers source 1..1943 /db_xref="H-InvDB:HIT000035289" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:20039 IMAGE:4558912" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1943 /gene="SMAD9" /gene_synonym="SMAD8A" /gene_synonym="SMAD8B" /db_xref="GeneID:4093" /db_xref="HGNC:HGNC:6774" /db_xref="MIM:603295" CDS 141..1433 /gene="SMAD9" /gene_synonym="SMAD8A" /gene_synonym="SMAD8B" /codon_start=1 /product="SMAD family member 9" /protein_id="AAH11559.1" /db_xref="GeneID:4093" /db_xref="HGNC:HGNC:6774" /db_xref="MIM:603295" /translation="MHSTTPISSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDSLVKK LKKKKGAMDELERALSCPGQPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQ SHHELKPLECCEFPFGSKQKEVCINPYHYRRVETPVLPPVLVPRHSEYNPQLSLLAKF RSASLHSEPLMPHNATYPDSFQQPPCSALPPSPSHAFSQSPCTASYPHSPGSPSEPES PYQHSDFRPVCYEEPQHWCSVAYYELNNRVGETFQASSRSVLIDGFTDPSNNRNRFCL GLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECVSDSSIFVQSRNCNYQHGFHPA TVCKIPSGCSLKVFNNQLFAQLLAQSVHHGFEVVYELTKMCTIRMSFVKGWGAEYHRQ DVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS" BASE COUNT 500 a 520 c 474 g 449 t ORIGIN 1 gcaacttgaa ttggtcccag ctgctcccag aagaacgggc gggttggtcc ctatgccacc 61 cctggagagc tactcgccgc ccactttgcc gtgaagggct gtgcggttcc cgtgcgcgcc 121 ggagcctgct gtggcctctt atgcactcca ccacccccat cagctccctc ttctccttca 181 ccagccccgc agtgaagaga ctgctaggct ggaagcaagg agatgaagag gaaaagtggg 241 cagagaaggc agtggactct ctagtgaaga agttaaagaa gaagaaggga gccatggacg 301 agctggagag ggctctcagc tgcccggggc agcccagcaa atgcgtcacg attccccgct 361 ccctggacgg gcggctgcag gtgtcccacc gcaagggcct gccccatgtg atttactgtc 421 gcgtgtggcg ctggccggat ctgcagtccc accacgagct gaagccgctg gagtgctgtg 481 agttcccatt tggctccaag cagaaagaag tgtgcattaa cccttaccac taccgccggg 541 tggagactcc agtactgcct cctgtgctcg tgccaagaca cagtgaatat aacccccagc 601 tcagcctcct ggccaagttc cgcagcgcct ccctgcacag tgagccactc atgccacaca 661 acgccaccta tcctgactct ttccagcagc ctccgtgctc tgcactccct ccctcaccca 721 gccacgcgtt ctcccagtcc ccgtgcacgg ccagctaccc tcactcccca ggaagtcctt 781 ctgagccaga gagtccctat caacactcag actttcgacc agtttgttac gaggagcccc 841 agcactggtg ctcggtcgcc tactatgaac tgaacaaccg agttggggag acattccagg 901 cttcctcccg aagtgtgctc atagatgggt tcaccgaccc ttcaaataac aggaacagat 961 tctgtcttgg acttctttct aatgtaaaca gaaactcaac gatagaaaat accaggagac 1021 atataggaaa gggtgtgcac ttgtactacg tcgggggaga ggtgtatgcc gagtgcgtga 1081 gtgacagcag catctttgtg cagagccgga actgcaacta tcaacacggc ttccacccag 1141 ctaccgtctg caagatcccc agcggctgca gcctcaaggt cttcaacaac cagctcttcg 1201 ctcagctcct ggcccagtca gttcaccacg gctttgaagt cgtgtatgaa ctgaccaaga 1261 tgtgtactat ccggatgagt tttgttaagg gttggggtgc tgagtatcat cgccaggatg 1321 tcaccagcac cccctgctgg attgagattc atcttcatgg gccactgcag tggctggaca 1381 aagttctgac tcagatgggc tctccacata accccatttc ttcagtgtct taacagtcat 1441 gtcttaagct gcatttccat aggatagagg ctattgcagg gagtggcttg tatcatttca 1501 gatttgcaac tgaagtttct aaaaacatgt gtaaatacat agaatgtata ctgttcttat 1561 tttttttaat caccgtttgt tttgtgcttt ctagttaacc tgatgccagt acagtgcaat 1621 tggaaaagca ggactttggt gcctgtgcta taagcagcag attttgtggg aggaaacact 1681 tgagaggcga tattgtcaac agtatttgaa gggtgttagc agaataaaag acagctttag 1741 tcagccgtgt cattataaag catgttgtgt ggcctcacag aaacattgaa actgtttata 1801 cagcaaaagt caggtattag cagcactaaa gcaaatatca ctcagatgaa acaaagcagt 1861 gaaaccctac agtttaaatg atgtcacttt tagtgctgtt ggcaagaaaa aaaaaaaaaa 1921 aaaccaaaaa aaaaaaaaaa aaa //