LOCUS BC011405 2372 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens proline-rich transmembrane protein 2, mRNA (cDNA clone MGC:9889 IMAGE:3868330), complete cds. ACCESSION BC011405 VERSION BC011405.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2372) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2372) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 13 Row: h Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21687111. FEATURES Location/Qualifiers source 1..2372 /db_xref="H-InvDB:HIT000035245" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9889 IMAGE:3868330" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2372 /gene="PRRT2" /gene_synonym="FLJ25513" /db_xref="GeneID:112476" /db_xref="HGNC:HGNC:30500" CDS 193..1215 /gene="PRRT2" /gene_synonym="FLJ25513" /codon_start=1 /product="proline-rich transmembrane protein 2" /protein_id="AAH11405.1" /db_xref="GeneID:112476" /db_xref="HGNC:HGNC:30500" /translation="MAASSSEISEMKGVEESPKVPGEGPGHSEAETGPPQVLAGVPDQ PEAPQPGPNTTAAPVDSGPKAGLAPETTETPAGASETAQATDLSLSPGGESKANCSPE DPCQETVSKPEVSKEATADQGSRLESAAPPEPAPEPAPQPDPRPDSQPSPKPALQPEL PTQEDPTPEILSESVGEKQENGAVVPLQAGDGEEGPAPEPHSPPSKKSPPANGAPPRV LQQLVEEDRMRRAHSGHPGSPRGSLSRHPSSQLAGPGVEGGEGTQKPRDYIILAILSC FCPMWPVNIVAFAYAVMSRNSLQQGDVDGAQRLGRVAKLLSIVALVGGVLIIIASCVI NLGVYK" BASE COUNT 490 a 794 c 637 g 451 t ORIGIN 1 cacgggagag gagaagaggg agacccgccg cctccctccc tccctagctg acttgctccc 61 tcccgggctg cggctgctgc aaaagccagc agcggcagcg ggagctgtcc ggaggccggc 121 gtcgagggtt tgccgctgtc tctgctattt ccatcctccc cataggggct ctctcccctc 181 tcccatctca agatggcagc cagcagctct gagatctctg agatgaaggg ggttgaggag 241 agtcccaagg ttccaggcga agggcctggc cattctgaag ctgaaactgg ccctccccag 301 gtcctagcag gggtaccaga ccagccagag gccccgcagc caggtccaaa caccactgcg 361 gcccctgtgg actcagggcc caaggctggg ctggctccag aaaccacaga gaccccggct 421 ggggcctcag aaacagccca ggccacagac ctcagcttaa gcccaggagg ggaatcaaag 481 gccaactgca gccccgaaga cccatgccaa gaaacagtgt ccaaaccaga agtgagcaaa 541 gaggccactg cagaccaggg gtccaggctg gagtctgcag ccccacctga accagcccca 601 gagcctgctc cccaaccaga cccccggcca gattcccagc cttcccccaa gccagccctt 661 caaccagagc tccctaccca ggaggacccc acccctgaga ttctgtctga gagtgtaggg 721 gaaaagcaag agaatggggc agtggtgccc ctgcaggctg gtgatgggga agagggccca 781 gcccctgagc ctcactcacc accctcaaaa aaatcccccc cagccaatgg ggcccccccc 841 cgagtgctgc agcagctggt tgaggaggat cgaatgagaa gggcacacag tgggcatcca 901 ggatctcccc gaggtagcct gagccgccac cccagctccc agctggcagg tcctggggtg 961 gaggggggtg aaggcaccca gaaacctcgg gactacatca tccttgccat cctgtcctgc 1021 ttctgcccca tgtggcctgt caacatcgtg gccttcgctt atgctgtcat gtcccggaac 1081 agcctgcagc agggggacgt ggacggggcc cagcgtctgg gccgggtagc caagctctta 1141 agcatcgtgg cgctggtggg gggagtcctc atcatcatcg cctcctgcgt catcaactta 1201 ggcgtgtata agtgaggggc tctgccccgc atcccaagac ttttcttcct gttgggagct 1261 gccttgggcc catccctccc ctggggggag cccaactgat ggccctggcc cccaccccta 1321 aggaccaagg gagcctgagc ggccttgttt acagcttctg tcctgctcct gcatcttgcc 1381 aggctcctct gccaactgta ggcctgcctc atccctgcac tggttccaac ctccctgcac 1441 taatgcctgc atcccctccg gcctcttggc cccctatccc tgcacttctg gaaacctccc 1501 tgcactctgg aaacctccct gaacacctcc ccaactctgc gctctcagcc tccctgcatc 1561 tctcctggcc tccctgcact tcttccagcc ccccaaattc tctggacctc caccctggcc 1621 gcctcctccc aactttcatt gtcttggcat ctctcaaccc tcagtcctct cttccttccc 1681 ttctttatca tctccccttt cctctccacg tcccgccccc ttcctcttcc tgcctcctca 1741 tctcccttaa gcatcctctt ctccaacctc ccgtcaccgt ttactctgca aaactgacag 1801 cacttagacg aggcttgggg gcagggagca gtgttgggag agggctcccc aaccccaggc 1861 tcggactgtt ctctgctggg accacccagg gtcggacacc caagggtgcc tggcaggtcg 1921 cagagttggc aagccgggcc tcgtatgggg actcgggtga gggtggcgag tactggttcc 1981 gaacgcacgc aggggagaag ggagggacgc ggcgctgacc cttccaggtc agctggagtt 2041 gacccgccca cctgggcttt tcaaccccag tccgcgagtt tctttcttga aggtgtgggg 2101 gctagattca ttcacgtgct tcgtaatgaa ataatccaaa aaataggacc aaagcgccca 2161 ctggcaggag cgagggcggg gcgccgcgct ctataattat tttctaagat gatgggggag 2221 gtttgttgca cgcgacagcc cgctgaggag gcggggaccg agctacaacg cggttcggat 2281 ttggcggggg tttttttcct taaaaaaaaa aaaaaaaaaa aaaaaaagtc tgggggaaga 2341 aaaaaactaa aattcttaaa aaaaaaaaaa aa //