LOCUS BC009693 1742 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger protein 36, C3H type, homolog (mouse),
mRNA (cDNA clone MGC:9162 IMAGE:3900312), complete cds.
ACCESSION BC009693
VERSION BC009693.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1742)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1742)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: m Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4507960.
FEATURES Location/Qualifiers
source 1..1742
/db_xref="H-InvDB:HIT000034509"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9162 IMAGE:3900312"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1742
/gene="ZFP36"
/gene_synonym="G0S24"
/gene_synonym="GOS24"
/gene_synonym="NUP475"
/gene_synonym="RNF162A"
/gene_synonym="TIS11"
/gene_synonym="TTP"
/db_xref="GeneID:7538"
/db_xref="HGNC:HGNC:12862"
/db_xref="MIM:190700"
CDS 41..1021
/gene="ZFP36"
/gene_synonym="G0S24"
/gene_synonym="GOS24"
/gene_synonym="NUP475"
/gene_synonym="RNF162A"
/gene_synonym="TIS11"
/gene_synonym="TTP"
/codon_start=1
/product="zinc finger protein 36, C3H type, homolog
(mouse)"
/protein_id="AAH09693.1"
/db_xref="GeneID:7538"
/db_xref="HGNC:HGNC:12862"
/db_xref="MIM:190700"
/translation="MDLTAIYESLLSLSPDVPVPSDHGGTESSPGWGSSGPWSLSPSD
SSPSGVTSRLPGRSTSLVEGRSCGWVPPPPGFAPLAPRLGPELSPSPTSPTATSTTPS
RYKTELCRTFSESGRCRYGAKCQFAHGLGELRQANRHPKYKTELCHKFYLQGRCPYGS
RCHFIHNPSEDLAAPGHPPVLRQSISFSGLPSGRRTSPPPPGLAGPSLSSSSFSPSSS
PPPPGDLPLSPSAFSAAPGTPLARRDPTPVCCPSCRRATPISVWGPLGGLVRTPSVQS
LGSDPDEYASSGSSLGGSDSPVFEAGVFAPPQPVAAPRRLPIFNRISVSE"
BASE COUNT 342 a 586 c 402 g 412 t
ORIGIN
1 ccactctcgg ccgacacccc tcatggccaa ccgttacacc atggatctga ctgccatcta
61 cgagagcctc ctgtcgctga gccctgacgt gcccgtgcca tccgaccatg gagggactga
121 gtccagccca ggctggggct cctcgggacc ctggagcctg agcccctccg actccagccc
181 gtctggggtc acctcccgcc tgcctggccg ctccaccagc ctagtggagg gccgcagctg
241 tggctgggtg cccccacccc ctggcttcgc accgctggct ccccgcctgg gccctgagct
301 gtcaccctca cccacttcgc ccactgcaac ctccaccacc ccctcgcgct acaagactga
361 gctatgtcgg accttctcag agagtgggcg ctgccgctac ggggccaagt gccagtttgc
421 ccatggcctg ggcgagctgc gccaggccaa tcgccacccc aaatacaaga cggaactctg
481 tcacaagttc tacctccagg gccgctgccc ctacggctct cgctgccact tcatccacaa
541 ccctagcgaa gacctggcgg ccccgggcca ccctcctgtg cttcgccaga gcatcagctt
601 ctccggcctg ccctctggcc gccggacctc accaccacca ccaggcctgg ccggcccttc
661 cctgtcctcc agctccttct cgccctccag ctccccacca ccacctgggg accttccact
721 gtcaccctct gccttctctg ctgcccctgg cacccccctg gctcgaagag accccacccc
781 agtctgttgc ccctcctgcc gaagggccac tcctatcagc gtctgggggc ccttgggtgg
841 cctggttcgg accccctctg tacagtccct gggatccgac cctgatgaat atgccagcag
901 cggcagcagc ctggggggct ctgactctcc cgtcttcgag gcgggagttt ttgcaccacc
961 ccagcccgtg gcagcccccc ggcgactccc catcttcaat cgcatctctg tttctgagtg
1021 acaaagtgac tgcccggtca gatcagctgg atctcagcgg ggagccacgt ctcttgcact
1081 gtggtctctg catggacccc agggctgtgg ggacttgggg gacagtaatc aagtaatccc
1141 cttttccaga atgcattaac ccactcccct gacctcacgc tggggcaggt ccccaagtgt
1201 gcaagctcag tattcatgat ggtgggggat ggagtgtctt ccgaggttct tgggggaaaa
1261 aaaattgtag catatttaag ggaggcaatg aaccctctcc cccacctctt ccctgcccaa
1321 atctgtctcc tagaatctta tgtgctgtga ataataggcc ttcactgccc ctccagtttt
1381 tatagacctg aggttccagt gtctcctggt aactggaacc tctcctgagg gggaatcctg
1441 gtgctcaaat taccctccaa aagcaagtag ccaaagccgt tgccaaaccc cacccataaa
1501 tcaatgggcc ctttatttat gacgacttta tttattctaa tatgatttta tagtatttat
1561 atatattggg tcgtctgctt cccttgtatt tttcttcctt tttttgtaat attgaaaacg
1621 acgatataat tattataagt agactataat atatttagta atatatatta ttaccttaaa
1681 agtctatttt tgtgttttgg gcatttttaa ataaacaatc tgagtgtaaa aaaaaaaaaa
1741 aa
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