LOCUS BC008600 774 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens chemokine (C-C motif) ligand 5, mRNA (cDNA clone MGC:17164 IMAGE:4185200), complete cds. ACCESSION BC008600 VERSION BC008600.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 774) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 774) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: m Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22538813. FEATURES Location/Qualifiers source 1..774 /db_xref="H-InvDB:HIT000033854" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17164 IMAGE:4185200" /tissue_type="Brain, glioblastoma with EGFR amplification" /clone_lib="NCI_CGAP_Brn64" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..774 /gene="CCL5" /gene_synonym="MGC17164" /gene_synonym="RANTES" /gene_synonym="SISd" /gene_synonym="TCP228" /db_xref="GeneID:6352" /db_xref="HGNC:HGNC:10632" /db_xref="MIM:187011" CDS 25..300 /gene="CCL5" /gene_synonym="MGC17164" /gene_synonym="RANTES" /gene_synonym="SISd" /gene_synonym="TCP228" /codon_start=1 /product="chemokine (C-C motif) ligand 5" /protein_id="AAH08600.1" /db_xref="GeneID:6352" /db_xref="HGNC:HGNC:10632" /db_xref="MIM:187011" /translation="MKVSAAALAVILIATALCAPASASPYSSDTTPCCFAYIARPLPR AHIKEYFYTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINSLEMS" BASE COUNT 200 a 236 c 185 g 153 t ORIGIN 1 cgcacagcct ctcccacagg taccatgaag gtctccgcgg cagccctcgc tgtcatcctc 61 attgctactg ccctctgcgc tcctgcatct gcctccccat attcctcgga caccacaccc 121 tgctgctttg cctacattgc ccgcccactg ccccgtgccc acatcaagga gtatttctac 181 accagtggca agtgctccaa cccagcagtc gtctttgtca cccgaaagaa ccgccaagtg 241 tgtgccaacc cagagaagaa atgggttcgg gagtacatca actctttgga gatgagctag 301 gatggagagt ccttgaacct gaacttacac aaatttgcct gtttctgctt gctcttgtcc 361 tagcttggga ggcttcccct cactatccta ccccacccgc tccttgaagg gcccagattc 421 taccacacag cagcagttac aaaaaccttc cccaggctgg acgtggtggc tcacgcctgt 481 aatcccagca ctttgggagg ccaaggtggg tggatcactt gaggtcagga gttcgagacc 541 agcctggcca acatgatgaa accccatctc tactaaaaat acaaaaaatt agccgggcgt 601 ggtagcgggc gcctgtagtc ccagctactc gggaggctga ggcaggagaa tggcgtgaac 661 ccgggaggcg gagcttgcag tgagccgaga tcgcgccact gcactccagc ctgggcgaca 721 gagcgagact ccgtctcaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa //