LOCUS BC008426 2312 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens palmitoyl-protein thioesterase 1, mRNA (cDNA clone
MGC:14590 IMAGE:4249991), complete cds.
ACCESSION BC008426
VERSION BC008426.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2312)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2312)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: g Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50726955.
FEATURES Location/Qualifiers
source 1..2312
/db_xref="H-InvDB:HIT000033785"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14590 IMAGE:4249991"
/tissue_type="Prostate"
/clone_lib="NIH_MGC_83"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2312
/gene="PPT1"
/gene_synonym="CLN1"
/gene_synonym="INCL"
/db_xref="GeneID:5538"
/db_xref="HGNC:HGNC:9325"
/db_xref="MIM:600722"
CDS 13..933
/gene="PPT1"
/gene_synonym="CLN1"
/gene_synonym="INCL"
/codon_start=1
/product="palmitoyl-protein thioesterase 1"
/protein_id="AAH08426.1"
/db_xref="GeneID:5538"
/db_xref="HGNC:HGNC:9325"
/db_xref="MIM:600722"
/translation="MASPGCLWLLAVALLPWTCASRALQHLDPPAPLPLVIWHGMGDS
CCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTVCQALAKD
PKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMINLISVGGQHQGVFGLPRCPGESSHIC
DFIRKTLNAGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIFLADINQERGINESYKKN
LMALKKFVMVKFLNDSIVDPVDSEWFGFYRSGQAKETIPLQETSLYTQDRLGLKEMDN
AGQLVFLATEGDHLQLSEEWFYAHIIPFLG"
BASE COUNT 656 a 508 c 517 g 631 t
ORIGIN
1 gacacagcga agatggcgtc gcccggctgc ctgtggctct tggctgtggc tctcctgcca
61 tggacctgcg cttctcgggc gctgcagcat ctggacccgc cggcgccgct gccgttggtg
121 atctggcatg ggatgggaga cagctgttgc aatcccttaa gcatgggtgc tattaaaaaa
181 atggtggaga agaaaatacc tggaatttac gtcttatctt tagagattgg gaagaccctg
241 atggaggacg tggagaacag cttcttcttg aatgtcaatt cccaagtaac aacagtgtgt
301 caggcacttg ctaaggatcc taaattgcag caaggctaca atgctatggg attctcccag
361 ggaggccaat ttctgagggc agtggctcag agatgccctt cacctcccat gatcaatctg
421 atctcggttg ggggacaaca tcaaggtgtt tttggactcc ctcgatgccc aggagagagc
481 tctcacatct gtgacttcat ccgaaaaaca ctgaatgctg gggcgtactc caaagttgtt
541 caggaacgcc tcgtgcaagc cgaatactgg catgacccca taaaggagga tgtgtatcgc
601 aaccacagca tcttcttggc agatataaat caggagcggg gtatcaatga gtcctacaag
661 aaaaacctga tggccctgaa gaagtttgtg atggtgaaat tcctcaatga ttccattgtg
721 gaccctgtag attcggagtg gtttggattt tacagaagtg gccaagccaa ggaaaccatt
781 cccttacagg agacctccct gtacacacag gaccgcctgg ggctaaagga aatggacaat
841 gcaggacagc tagtgtttct ggctacagaa ggggaccatc ttcagttgtc tgaagaatgg
901 ttttatgccc acatcatacc attccttgga tgaaacccgt atagttcaca atagagctca
961 gggagcccct aactcttcca aaccacatgg gagacagttt ccttcatgcc caagcctgag
1021 ctcagatcca gcttgcaact aatccttcta tcatctaaca tgccctactt ggaaagatct
1081 aagatctgaa tcttatcctt tgccatcttc tgttaccata tggtgttgaa tgcaagttta
1141 attaccatgg agattgtttt acaaactttt gatgtggtca agttcagttt tagaaaaggg
1201 agtctgttcc agatcagtgc cagaactgtg cccaggccca aaggagacaa ctaactaaag
1261 tagtgagata gattctaagg gcaaacattt ttccaagtct tgccatattt caagcaaaga
1321 ggtgcccagg cctgaggtac tcacataaat gctttgtttt gctggtgatt taaccagtgc
1381 ttggaaaaat cttgcttggc tatttctgca tcatttctta aggctgcctt cctctctcag
1441 tacgttgccc tctgtgctat catcttatca tcaattatta gacaaatccc actggcctac
1501 ggtcttgctt ctgcagcacc cactttgtct cctcaggtag tgatgaatta gttgctgtca
1561 caaaaggagg aaagtagcac ccaaattaag ttgcttaaga gaggaaatgt acatcttgta
1621 taacttaggg agcgaagaaa atgtaggcgc gaaagtgaaa agtgaggcag ctagttcttc
1681 ctattccatt ctcgaccaac ctgccctttc ttaatatgac tagtggtctt gatgctagag
1741 tcaacttact ctgttgctgg ctttagcaga gaataggagg aaccatatga aaaagatcag
1801 gctttctgac ttccatcccc aaaacacatt taccagcata ctccaaactg tttctgatgt
1861 gttccatgag aaaaggattg tttgctcaaa aagcttggaa aatactacac actccctttc
1921 tccttctgga gatcaaccca cattagagtg tctaaggact cctgagaatt cctgttacag
1981 taaacaaaac taacgtaatc taccatttcc tacactattt gagcatggaa atcatagtcc
2041 ccactctgtg aaaacttaac gctttttgga agacatttct gtagcatgtc agtttggaga
2101 aatgatgagc tacgccttga tgaaagaacc gtgttggtgc tgctaagttt agccattatg
2161 gtttttcctt tctctctctt aagccttatt cttcaactaa aagatgagga ttaagagcaa
2221 gaagttgggg gggatgtgaa aataatttta tgaggttgtc taaaataaag agtagtttct
2281 taacaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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