LOCUS BC003370 609 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens cystatin B (stefin B), mRNA (cDNA clone MGC:5180 IMAGE:2900656), complete cds. ACCESSION BC003370 VERSION BC003370.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 609) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 609) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 3 Row: g Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 20357564. FEATURES Location/Qualifiers source 1..609 /db_xref="H-InvDB:HIT000031523" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:5180 IMAGE:2900656" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_10" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..609 /gene="CSTB" /gene_synonym="CST6" /gene_synonym="cystatin B" /gene_synonym="PME" /db_xref="GeneID:1476" /db_xref="HGNC:HGNC:2482" /db_xref="MIM:601145" CDS 45..341 /gene="CSTB" /gene_synonym="CST6" /gene_synonym="cystatin B" /gene_synonym="PME" /codon_start=1 /product="cystatin B (stefin B)" /protein_id="AAH03370.1" /db_xref="GeneID:1476" /db_xref="HGNC:HGNC:2482" /db_xref="MIM:601145" /translation="MMCGAPSATQPATAETQHIADQVRSQLEEKENKKFPVFKAVSFK SQVVAGTNYFIKVHVGDEDFVHLRVFQSLPHENKPLTLSNYQTNKAKHDELTYF" BASE COUNT 161 a 170 c 130 g 148 t ORIGIN 1 ccctcgccga gtcccctcgc cagattccct ccgtcgccgc caagatgatg tgcggggcgc 61 cctccgccac gcagccggcc accgccgaga cccagcacat cgccgaccag gtgaggtccc 121 agcttgaaga gaaagaaaac aagaagttcc ctgtgtttaa ggccgtgtca ttcaagagcc 181 aggtggtcgc ggggacaaac tacttcatca aggtgcacgt cggcgacgag gacttcgtac 241 acctgcgagt gttccaatct ctccctcatg aaaacaagcc cttgacctta tctaactacc 301 agaccaacaa agccaagcat gatgagctga cctatttctg atcctgactt tggacaaggc 361 ccttcagcca gaagactgac aaagtcatcc tccgtctacc agagcgtgca cttgtgatcc 421 taaaataagc ttcatctccg ggctgtgccc cttggggtgg aaggggcagg attctgcagc 481 tgcttttgca tttctcttcc taaatttcat tgtgttgatt tctttccttc ccaataggtg 541 atcttaatta ctttcagaat attttcaaaa tagatatatt tttaaaatcc ttaaaaaaaa 601 aaaaaaaaa //