LOCUS BC003177 2935 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens calcium binding and coiled-coil domain 1, mRNA (cDNA clone MGC:4414 IMAGE:2957946), complete cds. ACCESSION BC003177 VERSION BC003177.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2935) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2935) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 9 Row: b Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 14149741. FEATURES Location/Qualifiers source 1..2935 /db_xref="H-InvDB:HIT000031491" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4414 IMAGE:2957946" /tissue_type="Kidney, renal cell adenocarcinoma" /clone_lib="NIH_MGC_14" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2935 /gene="CALCOCO1" /gene_synonym="calphoglin" /gene_synonym="Cocoa" /gene_synonym="KIAA1536" /gene_synonym="PP13275" /db_xref="GeneID:57658" /db_xref="HGNC:HGNC:29306" CDS 52..2127 /gene="CALCOCO1" /gene_synonym="calphoglin" /gene_synonym="Cocoa" /gene_synonym="KIAA1536" /gene_synonym="PP13275" /codon_start=1 /product="calcium binding and coiled-coil domain 1" /protein_id="AAH03177.1" /db_xref="GeneID:57658" /db_xref="HGNC:HGNC:29306" /translation="MEESPLSRAPSRGGVNFLNVARTYIPNTKVECHYTLPPGTMPSA SDWIGIFKVEAACVRDYHTFVWSSVPESTTDGSPIHTSVQFQASYLPKPGAQLYQFRY VNRQGQVCGQSPPFQFREPRPMDELVTLEEADGGSDILLVVPKATVLQNQLDESQQER NDLMQLKLQLEGQVTELRSRVQELERALATARQEHTELMEQYKGISRSHGEITEERDI LSRQQGDHVARILELEDDIQTISEKVLTKEVELDRLRDTVKALTREQEKLLGQLKEVQ ADKEQSEAELQVAQQENHHLNLDLKEAKSWQEEQSAQAQRLKDKVAQMKDTLGQAQQR VAELEPLKEQLRGAQELAASSQQKATLLGEELASAAAARDRTIAELHRSRLEVAEVNG RLAELGLHLKEEKCQWSKERAGLLQSVEAEKDKILKLSAEILRLEKAVQEERTQNQVF KTELAREKDSSLVQLSESKRELTELRSALRVLQKEKEQLQEEKQELLEYMRKLEARLE KVADEKWNEDATTEDEEAAVGLSCPAALTDSEDESPEDMRLPPYGLCERGDPGSSPAG PREASPLVVISQPAPISPHLSGPAEDSSSDSEAEDEKSVLMAAVQSGGEEANLLLPEL GSAFYDMASGFTVGTLSETSTGGPATPTWKECPICKERFPAESDKDALEDHMDGHFFF STQDPFTFE" BASE COUNT 723 a 781 c 827 g 604 t ORIGIN 1 gaggggaaca gctgatccgt ctgttgggag gacagatatc tcaaggccag gatggaagaa 61 tcaccactaa gccgggcacc atcccgtggt ggagtcaact ttctcaatgt agcccggacc 121 tacatcccca acaccaaggt ggaatgtcac tacacccttc ccccaggcac catgcccagt 181 gccagtgact ggattggcat cttcaaggtg gaggctgcct gtgttcggga ttaccacaca 241 tttgtgtggt cttccgtgcc tgaaagtaca actgatggtt cccccattca caccagtgtc 301 cagttccaag ccagctacct gcccaaacca ggagctcagc tctaccagtt ccgatatgtg 361 aaccgccagg gccaggtgtg tgggcagagc ccccctttcc agttccgaga gccaaggccc 421 atggatgaac tggtgaccct ggaggaggct gatgggggct ctgacatcct gctggttgtc 481 cccaaggcaa ctgtgttaca gaaccagctc gatgagagcc agcaagaacg gaatgacctg 541 atgcagctga agctacagct ggagggacag gtgacagagc tgaggagccg agtgcaggag 601 ctcgagaggg ctctggcaac tgccaggcag gagcacacgg agctgatgga acagtacaag 661 gggatttccc ggtcccatgg ggagatcaca gaagagaggg acatcctgag ccggcaacag 721 ggagaccatg tggcacgcat cctggagcta gaggatgaca tccagaccat cagtgagaaa 781 gtgctgacga aggaagtgga gctggacagg cttagagaca cagtgaaggc cctgactcgg 841 gaacaagaga agctccttgg gcaactgaaa gaagtacaag cagacaagga gcaaagtgag 901 gctgagctcc aagtggcaca acaggagaac catcacttaa atttggacct gaaggaggcg 961 aagagctggc aagaggagca gagtgctcag gctcagcgac tgaaagacaa ggtggcccag 1021 atgaaggaca ccctaggcca ggcccagcag cgggtggccg agctggagcc cttgaaggag 1081 cagcttcgag gggcccagga gcttgcagcc tcaagccagc agaaagccac ccttcttggg 1141 gaggagttgg ccagtgcagc agcagccagg gaccgcacca tagccgaact acaccgcagc 1201 cgcctggaag tggctgaagt taacggcagg ctggctgagc tcggtttgca cttgaaggaa 1261 gaaaaatgcc aatggagcaa ggagcgggca gggctgctgc agagtgtgga ggcagagaag 1321 gacaagatcc tgaagctgag tgcagagata cttcgattgg agaaggcagt tcaggaggag 1381 aggacccaaa accaagtgtt caagactgag ctggcccggg agaaggattc tagcctggta 1441 cagttgtcag aaagtaagcg ggagctgaca gagctgcggt cagccctgcg tgtgctccag 1501 aaggaaaagg agcagttaca ggaggagaaa caggaattgc tagagtacat gagaaagcta 1561 gaggcccgcc tggagaaggt ggcagatgag aagtggaatg aggatgccac cacagaggat 1621 gaggaggccg ctgtggggct gagctgcccg gcagctctga cagactcaga ggacgagtcc 1681 ccagaagaca tgaggctccc accctatggc ctttgtgagc gtggagaccc aggctcctct 1741 cctgctgggc ctcgagaggc ttctcccctt gttgtcatca gccagccggc tcccatttct 1801 cctcacctct ctgggccagc tgaggacagt agctctgact cggaggctga agatgagaag 1861 tcagtcctga tggcagctgt gcagagtggg ggtgaggagg ccaacttact gcttcctgaa 1921 ctgggcagtg ccttctatga catggccagt ggctttacag tgggtaccct gtcagaaacc 1981 agcactgggg gccctgccac ccccacatgg aaggagtgtc ctatctgtaa ggagcgcttt 2041 cctgctgaga gtgacaagga tgccctggag gaccacatgg atggacactt ctttttcagc 2101 acccaggacc ccttcacctt tgagtgatct tactccctcg tacatgcaca aatacacact 2161 catgcacaca cacactcaca cacatgcata cacttaggtt tcatgcccat tttctatcac 2221 actgggctcc atgatattct gttccctaag aactgcttct gtgtgccctg ttttcatccc 2281 aagatttctc acttcatcct ctcctacctg gctcttttgt cccagggagg ggtcctgttc 2341 ggaagcagtg gctgaattta tcccctgaaa gtggttttgg aggaaccggg atggaggagg 2401 ccttcccctg tgggaataga atcgtccact cctagccctg gttgcttctg atacacagcc 2461 actgcacaca cacactcaca ctcacactcc cttgtctgat gccccaaagc caattcctgg 2521 ggcaccctac cctctcttat ttggagtttc cgttggttta cctgagtttt ctctggggtc 2581 tgcacagagg cagcagcatg gacatcatgg cctctcaggt cccttttggt tctcagtttc 2641 attggttcct ctttctgttc ccccattgac ttctgtgccc caccctagcc ttttccataa 2701 ccttaggtat tcagtttgga ggggtttttt gtatttttga ggattcctgt attctgtatc 2761 ctctcctcgc atctcctcac atggaaagaa ataatgtatt tgtgccttct gtgaggaatg 2821 gggggaacaa gtggtcccag gtatccccat ttccaaggcc cccctccctc tccaggtccc 2881 cccacagcaa taaaagcttc cccctgatat ccaaaaaaaa aaaaaaaaaa aaaaa //