LOCUS BC002862 1671 bp mRNA linear HUM 19-MAR-2009 DEFINITION Homo sapiens aldo-keto reductase family 1, member C-like 2, mRNA (cDNA clone MGC:10612 IMAGE:3941289), complete cds. ACCESSION BC002862 VERSION BC002862.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1671) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1671) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC002862.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 15 Row: a Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34147396 The stop codon of the CDS annotated on this record is located > 55 bases upstream of a splice junction, and therefore the mRNA is predicted to be subject to nonsense-mediated mRNA decay (NMD). FEATURES Location/Qualifiers source 1..1671 /db_xref="H-InvDB:HIT000031247" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:10612 IMAGE:3941289" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1671 /gene="AKR1CL2" /gene_synonym="LoopADR" /db_xref="GeneID:83592" /db_xref="HGNC:HGNC:23437" CDS 92..1015 /gene="AKR1CL2" /gene_synonym="LoopADR" /codon_start=1 /product="AKR1CL2 protein" /protein_id="AAH02862.1" /db_xref="GeneID:83592" /db_xref="HGNC:HGNC:23437" /translation="MGDIPAVGLSSWKASPGKVTEAVKEAIDAGYRHFDCAYFYHNER EVGAGIRCKIKEGAVRREDLFIATKLWCTCHKKSLVETACRKSLKALKLNYLDLYLIH WPMGFKPPHPEWIMSCSELSFCLSHPRVQDLPLDESNMVIPSDTDFLDTWEAMEDLVI TGLVKNIGVSNFNHEQLERLLNKPGLRFKPLTNQIECHPYLTQKNLISFCQSRDVSVT AYRPLGGSCEGVDLIDNPVIKRIAKEHGKSPAQILIRFQIQRNVIVIPGSITPSHIKE NIQVFDFELTQHDMDNILSLNRNLRLAMFPM" BASE COUNT 434 a 413 c 425 g 399 t ORIGIN 1 acggcgggtc gccagcgcct cagtagctcg cgcggtgcct gtcggtagtc gcgtgcgggg 61 cggcggggcg gcggggcggc cggcggcggc catgggagat atcccagccg tgggcctcag 121 ctcctggaag gcttctccag ggaaagtgac cgaggcagtg aaagaggcca ttgacgcagg 181 gtaccggcac ttcgactgtg cttactttta ccacaatgag agggaggttg gagcagggat 241 ccgttgcaag atcaaggaag gcgctgtaag acgggaggat ctgttcattg ccactaagct 301 gtggtgcacc tgccataaga agtccttggt ggaaacagca tgcagaaaga gtctcaaggc 361 cttgaagctg aactatttgg acctctacct catacactgg cccatgggtt tcaagcctcc 421 tcatccagaa tggatcatga gctgcagtga actttccttc tgcctctcac atcctcgagt 481 gcaggacttg cctctggacg agagcaacat ggttattccc agtgacacgg acttcctgga 541 cacgtgggag gccatggagg acctggtgat caccgggctg gtgaagaaca tcggggtgtc 601 aaacttcaac catgaacagc ttgagaggct tttgaataag cctgggttga ggttcaagcc 661 actaaccaac cagattgagt gccacccata tcttactcag aagaatctga tcagtttttg 721 ccaatccaga gatgtgtccg tgactgctta ccgtcctctt ggtggctcgt gtgagggggt 781 tgacctgata gacaaccctg tgatcaagag gattgcaaag gagcacggca agtctcctgc 841 tcagattttg atccgatttc aaatccagag gaatgtgata gtgatccccg gatctatcac 901 cccaagtcac attaaagaga atatccaggt gtttgatttt gaattaacac agcacgatat 961 ggataacatc ctcagcctaa acaggaatct ccgactggcc atgttcccca tgtaaatatg 1021 gctccttctt tttaaaacag agggaagaat atacagattg aatgattggt gtctgaatag 1081 aactaaaaat cacaaagact atcctttcca catagaatac tgaggacgct tccccttcct 1141 tgtttctgct cagcccagat gcacagacac tattggcaat gttgaccctc ctctgtcatc 1201 acagcgccag ggcagctgtg cctgggacag gagccacaca gtcagagggg gatgtaagag 1261 ccaccttctc tgacaaatct ggagaattga gtgtgttcta agtgaaggca atggggtttc 1321 tccaagacag cctgtgtggc ctctactctg aacaaataca ctgatgagtc atcagtgaaa 1381 tttgccttca cattttaaga aaactttatc ttatggagtt atttaagcca tctacagagc 1441 tgaggaaaca gtgtaatgtg tctctgcccc attgcgcagc tccacccatt gtgccccagg 1501 ccagcccgcg tcacctacac ttccttctgt gccctgccag tgacccccag gttattctaa 1561 agcagagtcc ttcccttccc ccagtgagaa ggaaaatggg ataagtctgg gacactgttt 1621 cagttcaata aagaggcttt tttcttcctt aaaaaaaaaa aaaaaaaaaa a //