LOCUS BC000510 867 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens heat shock 27kDa protein 1, mRNA (cDNA clone MGC:8509
IMAGE:2822325), complete cds.
ACCESSION BC000510
VERSION BC000510.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 867)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 867)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000510.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: h Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4996892.
FEATURES Location/Qualifiers
source 1..867
/db_xref="H-InvDB:HIT000029692"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8509 IMAGE:2822325"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..867
/gene="HSPB1"
/gene_synonym="CMT2F"
/gene_synonym="HS.76067"
/gene_synonym="Hsp25"
/gene_synonym="HSP27"
/gene_synonym="HSP28"
/db_xref="GeneID:3315"
/db_xref="HGNC:HGNC:5246"
/db_xref="MIM:602195"
CDS 100..717
/gene="HSPB1"
/gene_synonym="CMT2F"
/gene_synonym="HS.76067"
/gene_synonym="Hsp25"
/gene_synonym="HSP27"
/gene_synonym="HSP28"
/codon_start=1
/product="heat shock 27kDa protein 1"
/protein_id="AAH00510.1"
/db_xref="GeneID:3315"
/db_xref="HGNC:HGNC:5246"
/db_xref="MIM:602195"
/translation="MTERRVPFSLLRGPSWDPFRDWYPHSRLFDQAFGLPRLPEEWSQ
WLGGSSWPGYVRPLPPAAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWRVSLDVN
HFAPDELTVKTKDGVVEITGKHEERQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPE
GTLTVEAPMPKLATQSNEITIPVTFESRAQLGGPEAAKSDETAAK"
BASE COUNT 185 a 312 c 234 g 136 t
ORIGIN
1 ccgcctgcta aaaatacccg actggaggag cataaaagcg cagccgagcc cagcgccccg
61 cacttttctg agcagacgtc cagagcagag tcagccagca tgaccgagcg ccgcgtcccc
121 ttctcgctcc tgcggggccc cagctgggac cccttccgcg actggtaccc gcatagccgc
181 ctcttcgacc aggccttcgg gctgccccgg ctgccggagg agtggtcgca gtggttaggc
241 ggcagcagct ggccaggcta cgtgcgcccc ctgccccccg ccgccatcga gagccccgca
301 gtggccgcgc ccgcctacag ccgcgcgctc agccggcaac tcagcagcgg ggtctcggag
361 atccggcaca ctgcggaccg ctggcgcgtg tccctggatg tcaaccactt cgccccggac
421 gagctgacgg tcaagaccaa ggatggcgtg gtggagatca ccggcaagca cgaggagcgg
481 caggacgagc atggctacat ctcccggtgc ttcacgcgga aatacacgct gccccccggt
541 gtggacccca cccaagtttc ctcctccctg tcccctgagg gcacactgac cgtggaggcc
601 cccatgccca agctagccac gcagtccaac gagatcacca tcccagtcac cttcgagtcg
661 cgggcccagc ttgggggccc agaagctgca aaatccgatg agactgccgc caagtaaagc
721 cttagcccgg atgcccaccc ctgctgccgc cactggctgt gcctcccccg ccacctgtgt
781 gttcttttga tacatttatc ttctgttttt ctcaaataaa gttcaaagca ccccccaaaa
841 aaaaaaaaaa aaaaaaaaaa aaaaaaa
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