LOCUS BC000311 1536 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Kruppel-like factor 6, mRNA (cDNA clone MGC:8426
IMAGE:2821009), complete cds.
ACCESSION BC000311
VERSION BC000311.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1536)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1536)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000311.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: e Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56550115.
FEATURES Location/Qualifiers
source 1..1536
/db_xref="H-InvDB:HIT000029508"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8426 IMAGE:2821009"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1536
/gene="KLF6"
/gene_synonym="CPBP"
/gene_synonym="GBF"
/gene_synonym="PAC1"
/gene_synonym="ZF9"
/db_xref="GeneID:1316"
/db_xref="HGNC:HGNC:2235"
/db_xref="MIM:602053"
CDS 187..1038
/gene="KLF6"
/gene_synonym="CPBP"
/gene_synonym="GBF"
/gene_synonym="PAC1"
/gene_synonym="ZF9"
/codon_start=1
/product="Kruppel-like factor 6"
/protein_id="AAH00311.1"
/db_xref="GeneID:1316"
/db_xref="HGNC:HGNC:2235"
/db_xref="MIM:602053"
/translation="MDVLPMCSIFQELQIVHETGYFSALPSLEEYWQQTCLELERYLQ
SEPCYVSASEIKFDSQEDLWTKIILAREKKEESELKISSSPPEDTLISPSFCYNLETN
SLNSDVSSESSDSSEELSPTAKFTSDPIGEVLVSSGKLSSSVTSTPPSSPELSREPSQ
LWGCVPGELPSPGKVRSGTSGKPGDKGNGDASPDGRRRVHRCHFNGCRKVYTKSSHLK
AHQRTHTGEKPYRCSWEGCEWRFARSDELTRHFRKHTGAKPFKCSHCDRCFSRSDHLA
LHMKRHL"
BASE COUNT 360 a 415 c 438 g 323 t
ORIGIN
1 ccggtgtttg caaatattgt gtgggctccg cgcgctgcgg gctgcgggag gttccggccg
61 ggcgtctctg cgagcctgga gtttgcatga aactttcacc tgcgctccgg ggagactttc
121 ggctccggct cccaccgcgc gcctcgccgc cctcgcgacc gcgggctccg tccaacccgg
181 cccgacatgg acgtgctccc catgtgcagc atcttccagg agctccagat cgtgcacgag
241 accggctact tctcggcgct gccgtctctg gaggagtact ggcaacagac ctgcctagag
301 ctggaacgtt acctccagag cgagccctgc tatgtttcag cctcagaaat caaatttgac
361 agccaggaag atctgtggac caaaatcatt ctggctcggg agaaaaagga ggaatccgaa
421 ctgaagatat cttccagtcc tccagaggac actctcatca gcccgagctt ttgttacaac
481 ttagagacca acagcctgaa ctcagatgtc agcagcgaat cctctgacag ctccgaggaa
541 ctttctccca cggccaagtt tacctccgac cccattggcg aagttttggt cagctcggga
601 aaattgagct cctctgtcac ctccacgcct ccatcttctc cggaactgag cagggaacct
661 tctcaactgt ggggttgcgt gcccggggag ctgccctcgc cagggaaggt gcgcagcggg
721 acttcgggga agccaggtga caagggaaat ggcgatgcct cccccgacgg caggaggagg
781 gtgcaccggt gccactttaa cggctgcagg aaagtttaca ccaaaagctc ccacttgaaa
841 gcacaccagc ggacgcacac aggagaaaag ccttacagat gctcatggga agggtgtgag
901 tggcgttttg caagaagtga tgagttaacc aggcacttcc gaaagcacac cggggccaag
961 ccttttaaat gctcccactg tgacaggtgt ttttccaggt ctgaccacct ggccctgcac
1021 atgaagaggc acctctgagg gagcagagag gtggatcctg taggctaaaa ggcttccagg
1081 ctgagagccg gccgtggaag gagggatgcg tgttccagcc aaagcatgcc gttctgcacc
1141 ctacccagtt gcctccaggg cctctccttg gaaggtcttt tgagggctaa aaaggtcctg
1201 taagaagcgg catagcaccc gtggtgcatg gtatgtgggt gaccctggac tcgccactgg
1261 tacccgccct tccgagcggc gcctaagcct ttgccgtgag catgcacact gagaatgcta
1321 atggttgggt tgattgtatg ttgaggatct attactgacc gtatgatgag gccaactttt
1381 tttccttgtg gttagcaaga ctgcaagaga tggaaaaaaa gtagtttgaa tgttttgtgt
1441 gaaaggagta taccatgaga tgagatgacc accaatcatt tccttggggg gagggggtgt
1501 ctgcccctta gaaaaaaaaa aaaaaaaaaa aaaaaa
//