LOCUS AK096346 3788 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ39027 fis, clone NT2RP7006223, weakly similar
to Vegetative cell wall protein gp1 precursor.
ACCESSION AK096346
VERSION AK096346.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3788)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Kanehori,K., Ishibashi,T., Chiba,Y., Fujimori,K., Hiraoka,S.,
Tanai,H., Watanabe,S., Ishida,S., Ono,Y., Hotuta,T., Watanabe,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H.,
Kanda,K., Wagatsuma,M., Takahashi-Fujii,A., Oshima,A.,
Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K.,
Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..3788
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7006223"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000021201"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 310..2748
/codon_start=1
/note="weakly similar to Vegetative cell wall protein gp1
precursor"
/protein_id="BAG53268.1"
/translation="MEAFQELRKPSARLECDHCSFRGTDYENVQIHMGTIHPEFCDEM
DAGGLGKMIFYQKSAKLFHCHKCFFTSKMYSNVYYHITSKHASPDKWNDKPKNQLNKE
TDPVKSPPLPEHQKIPCNSAEPKSIPALSMETQKLGSVLSPESPKPTPLTPLEPQKPG
SVVSPELQTPLPSPEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESV
KATLSNPKPQKQSHFPETLGPPSASSPESPVLAASPEPWGPSPAASPESRKSARTTSP
EPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPW
KPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESWKS
GPPELRKTAPTLSPEHWKAVPPVSPELRKPGPPLSPEIRSPAGSPELRKPSGSPDLWK
LSPDQRKTSPASLDFPESQKSSRGGSPDLWKSSFFIEPQKPVFPETRKPGPSGPSESP
KAASDIWKPVLSIDTEPRKPALFPEPAKTAPPASPEARKRALFPEPRKHALFPELPKS
ALFSESQKAVELGDELQIDAIDDQKCDILVQEELLASPKKLLEDTLFPSSKKLKKDNQ
ESSDAELSSSEYIKTDLDAMDIKGQESSSDQEQVDVESIDFSKENKMDMTSPEQSRNV
LQFTEEKEAFISEEEIAKYMKRGKGKYYCKICCCRAMKKGAVLHHLVNKHNVHSPYKC
TICGKAFLLESLLKNHVAAHGQSLLKCPRCNFESNFPRGFKKHLTHCQSRHNEEANKK
LMEALEPPLEEQQI"
BASE COUNT 1063 a 913 c 735 g 1077 t
ORIGIN
1 atcccggctc ctgcatccag tcgccattcg ggaggccgct gcgctgcagg gcctcgcgga
61 gccgcccgcg accgcgagcc gggccctccg cgcggtccat cgcccactgg acgccgcccg
121 cggccggacc ggttcaactt ctcatctttg ttcttcttca tatactatag gctgtttgct
181 gtggtttagt caaaaagcca tgtagaatgc ctgccttttg aagaccactt ttaaggtgtc
241 tagtaagaca gcagcagtat tgaaagtttt taaagaatat aaccgtgtgt gttggtaaca
301 gacagaagaa tggaagcatt ccaggaactt cgtaaaccat cagcacgttt ggagtgtgac
361 cattgcagtt tcagaggcac agactatgaa aatgtacaaa tccatatggg taccatccat
421 ccagaatttt gtgatgaaat ggatgctggt gggctaggca aaatgatatt ttaccagaaa
481 agtgcaaagt tatttcactg ccataaatgc ttcttcacca gcaagatgta ctctaatgta
541 tactatcaca tcacatccaa acatgcatcc ccagacaaat ggaatgataa accaaaaaat
601 cagttgaaca aagaaacaga tcctgtgaaa agccctcctc ttcctgaaca ccagaaaata
661 ccctgcaatt cagcagaacc aaaatccata cctgcccttt caatggaaac acagaaactt
721 ggttcagttt tgtctccaga atcgccaaaa cctactcctc ttactcccct ggagcctcag
781 aaacctggct ctgttgtttc tcctgagcta cagacacctc ttccttctcc tgagccttca
841 aaacctgcct ctgtttcttc tcctgaacct ccaaaatcag tccctgtttg tgagtctcag
901 aaacttgccc ctgttccttc tccagaacca cagaaacctg cccctgtatc tcctgagtca
961 gtaaaggcta ctcttagtaa tcccaaaccc cagaagcagt ctcatttccc ggaaacattg
1021 gggccacctt cagcctcatc tccagagtca ccagttctag ctgcttcccc agaaccttgg
1081 ggaccatccc cagctgcatc tccagaatct cggaagtcag cccggactac ctcccctgag
1141 ccaaggaagc catccccttc agagtctcct gaaccttgga agccgttccc tgctgtctcc
1201 ccagagccta ggagaccagc ccccgctgtg tcaccaggct cttggaaacc agggccacct
1261 gggtccccta ggccttggaa atccaatcct tcagcatcat caggaccttg gaagccagct
1321 aaacctgctc catctgtgtc tcctggacct tggaaaccaa ttccttctgt atctcctgga
1381 ccttggaaac caactccatc tgtgtcttct gcatcctgga aatcttcatc agtctcaccc
1441 agctcctgga agtctccccc tgcatctcct gagtcatgga agtctggccc accagaactc
1501 cgaaagacag ctcccacgtt gtctcctgaa cattggaagg cagttccccc agtgtctcca
1561 gagcttcgca aacccggccc accactatcc ccagagatcc gtagtccagc aggatctcca
1621 gagctcagaa aaccctcagg gtcaccagat ctttggaagc tttctcctga tcagcggaaa
1681 acttctcctg cttcacttga tttccctgag tcccagaaaa gttcccgtgg tggttctcct
1741 gatctctgga agtcttcctt ttttattgag cctcagaaac ctgtcttccc tgagacccga
1801 aaaccaggtc cttctgggcc atctgagtcc cccaaagcag cctcagatat ctggaagcct
1861 gttctctcta tcgatactga gcctagaaaa cctgccctgt ttcccgagcc tgccaaaaca
1921 gcccctcctg cttctccaga agcacgcaaa cgtgcccttt ttccagagcc ccggaagcat
1981 gcccttttcc ctgaactccc caaatctgct ctattctcag aatcacagaa ggctgttgag
2041 cttggtgatg aactacaaat agatgccata gatgatcaaa aatgtgatat tttggttcag
2101 gaagaacttc tagcttcacc taagaaactc ttagaagata ctttatttcc ttcctcaaag
2161 aagctcaaga aagacaacca agagagctca gacgctgagc ttagtagtag tgagtacata
2221 aaaacagatt tggatgcgat ggatattaag ggccaggaat caagcagtga tcaagagcag
2281 gttgatgtgg aatccattga ttttagcaaa gagaacaaaa tggacatgac tagtccagag
2341 cagtctagaa atgtgctaca gtttactgaa gaaaaagaag cttttatctc tgaagaggag
2401 attgcaaaat acatgaagcg tggaaaagga aagtattatt gcaaaatttg ttgctgtcgt
2461 gctatgaaaa aaggtgctgt tttgcatcat ttggttaata agcataatgt tcatagccct
2521 tacaaatgca caatctgtgg aaaggctttt cttttggaat ctctccttaa aaatcatgta
2581 gcagcccatg ggcaaagttt acttaaatgt ccacgttgta attttgaatc aaatttccca
2641 agaggtttta agaaacattt aactcattgt caaagccggc ataatgaaga ggcaaataaa
2701 aagctaatgg aagctcttga accgccactg gaggagcagc aaatttgata acacagtgtg
2761 aatatttgtt ctacaaaggt gtttgttgga accattcttt gtaagtatag cttatcagat
2821 agcatagttg gatcagtaga tgacatgtat ggtgtaccgt gtttcactgt ctcagttgtg
2881 ttactaagaa tgagcatttg atcatttttt tctggtctct gtctatgtga ctatcttgta
2941 agtcaataaa tttctgtata gtccagatgg attaaacttc tcatttcttt taaatatgta
3001 tgaataataa tacaaggaag taggcattcc atttaataat caagagcaag ttgtactcaa
3061 agcattcagt taaagtgtat ctgtgtgtgg aactaatttc agacaataga aaatattagt
3121 tgaaatgttt aagaattagg catgaaaaat aaatttgaga aattttgttt ccttacatgt
3181 atttttaaat cataagagtt attttctatc tgatgtaaaa ttagtttata aatcttaatc
3241 agcttctaga tgtttattag cttttatgtc atgaaatgtt ggagtctcag ggttgctgat
3301 tttctgctaa tgggaaaaat tgactaagtc tttaaaatag tttgcagcct tctcccacag
3361 gagacaagtg aaagataagt gtgattttag atctttcttg tccatagttg ttttcagtgg
3421 agtcttccat tctgtatctt accctaagat ctggttcttc cctccccatc cccacccccc
3481 acccaccgcc tgccagctca cactaataga tgattcttaa ttgccaaatg tgttagagtt
3541 tgtatatcct actcctgggc cttacatgtc gcctgttggg gcttaagacc aggttgataa
3601 gtaggaactg aaagtcttcc agattcacag tagaaaattt tatagacatt tctgttaaag
3661 aaatatatcg attttatgtt tttcaattat gttactgtaa ataccttgta cctgttcatg
3721 gattatttta ttctaaaata ttttgtcaaa tgtgtatcaa ccaaattaaa aagaaaggtt
3781 ttcatgtc
//