LOCUS AK095391 3250 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ38072 fis, clone CTONG2015678, weakly similar
to Rattus norvegicus PGC1 mRNA for PPAR gamma coactivator.
ACCESSION AK095391
VERSION AK095391.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3250)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tanigami,A., Fujiwara,T., Shibahara,T., Goto,Y., Hirao,M.,
Shimizu,F., Wakebe,H., Ono,T., Hishigaki,H., Watanabe,T.,
Ozaki,K., Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A.,
Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K.,
Nishikawa,T., Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K.,
Kanehori,K., Takahashi-Fujii,A., Oshima,A., Sugiyama,A.,
Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y.,
Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..3250
/clone="CTONG2015678"
/clone_lib="CTONG2"
/db_xref="H-InvDB:HIT000020246"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 33..3104
/codon_start=1
/protein_id="BAC04541.1"
/translation="MAGNDCGALLDEELSSFFLNYLADTQGGGSGEEQLYADFPELDL
SQLDASDFDSATCFGELQWCPENSETEPNQYSPDDSELFQIDSENEALLAELTKTLDD
IPEDDVGLAAFPALDGGDALSCTSASPAPSSAPPSPAPEKPSAPAPEVDELSLLQKLL
LATSYPTSSSDTQKEGTAWRQAGLRSKSQRPCVKADSTQDKKAPMMQSQSRSCTELHK
HLTSAQCCLQDRGLQPPCLQSPRLPAKEDKEPGEDCPSPQPAPASPRDSLALGRADPG
APVSQEDMQAMVQLIRYMHTYCLPQRKLPPQTPEPLPKACSNPSQQVRSRPWSRHHSK
ASWAEFSILRELLAQDVLCDVSKPYRLATPVYASLTPRSRPRPPKDSQASPGRPSSVE
EVRIAASPKSTGPRPSLRPLRLEVKREVRRPARLQQQEEEDEEEEEEEEEEEKEEEEE
WGRKRPGRGLPWTKLGRKLESSVCPVRRSRRLNPELGPWLTFADEPLVPSEPQGALPS
LCLAPKAYDVERELGSPTDEDSGQDQQLLRGPQIPALESPCESGCGDMDGDPSCPQLP
PRDSPRCLMLALSQSDPTFGKKSFEQTLTVELCGTAGLTPPTTPPYKPTEEDPFKPDI
KHSLGKEIALSLPSPEGLSLKATPGAAHKLPKKHPERSELLSHLRHATAQPASQAGQK
RPFSCSFGDHDYCQVLRPEGVLQRKVLRSWEPSGVHLEDWPQQGAPWAEAQAPGREED
RSCDAGAPPKDSTLLRDHEIRASLTKHFGLLETALEEEDLASCKSPEYDTVFEDSSSS
SGESSFLPEEEEEEGEEEEEDDEEEDSGVSPTCSDHCPYQSPPSKANRQLCSRSRSSS
GSSPCHSWSPATRRNFRCESRGPCSDRTPSIRHARKRREKAIGEGRVVYIQNLSSDMS
SRELKRRFEVFGEIEECEVLTRNRRGEKYGFITYRCSEHAALSLTKGAALRKRNEPSF
QLSYGGLRHFCWPRYTDYDSNSEEALPASGKSKYEAMDFDSLLKEAQQSLH"
BASE COUNT 748 a 1037 c 942 g 523 t
ORIGIN
1 actccgccgc acgctgcagc cgcggctgga agatggcggg gaacgactgc ggcgcgctgc
61 tggacgaaga gctctcctcc ttcttcctca actatctcgc tgacacgcag ggtggagggt
121 ccggggagga gcaactctat gctgactttc cagaacttga cctctcccag ctggatgcca
181 gcgactttga ctcggccacc tgctttgggg agctgcagtg gtgcccagag aactcagaga
241 ctgaacccaa ccagtacagc cccgatgact ccgagctctt ccagattgac agtgagaatg
301 aggccctcct ggcagagctc accaagaccc tggatgacat ccctgaagat gacgtgggtc
361 tggctgcctt cccagccctg gatggtggag acgctctatc atgcacctca gcttcgcctg
421 ccccctcatc tgcacccccc agccctgccc cggagaagcc ctcggcccca gcccctgagg
481 tggacgagct ctcactgctg cagaagctcc tcctggccac atcctaccca acatcaagct
541 ctgacaccca gaaggaaggg accgcctggc gccaggcagg cctcagatct aaaagtcaac
601 ggccttgtgt taaggcggac agcacccaag acaagaaggc tcccatgatg cagtctcaga
661 gccgaagttg tacagaacta cataagcacc tcacctcggc acagtgctgc ctgcaggatc
721 ggggtctgca gccaccatgc ctccagagtc cccggctccc tgccaaggag gacaaggagc
781 cgggtgagga ctgcccgagc ccccagccag ctccagcctc tccccgggac tccctagctc
841 tgggcagggc agaccccggt gccccggttt cccaggaaga catgcaggcg atggtgcaac
901 tcatacgcta catgcacacc tactgcctcc cccagaggaa gctgccccca cagacccctg
961 agccactccc caaggcctgc agcaacccct cccagcaggt cagatcccgg ccctggtccc
1021 ggcaccactc caaagcctcc tgggctgagt tctccattct gagggaactt ctggctcaag
1081 acgtgctctg tgatgtcagc aaaccctacc gtctggccac gcctgtttat gcctccctca
1141 cacctcggtc aaggcccagg ccccccaaag acagtcaggc ctcccctggt cgcccgtcct
1201 cggtggagga ggtaaggatc gcagcttcac ccaagagcac cgggcccaga ccaagcctgc
1261 gcccactgcg gctggaggtg aaaagggagg tccgccggcc tgccagactg cagcagcagg
1321 aggaggaaga cgaggaagaa gaggaggagg aagaggaaga agaaaaagag gaggaggagg
1381 agtggggcag gaaaaggcca ggccgaggcc tgccatggac gaagctgggg aggaagctgg
1441 agagctctgt gtgccccgtg cggcgttctc ggagactgaa ccctgagctg ggcccctggc
1501 tgacatttgc agatgagccg ctggtcccct cggagcccca aggtgctctg ccctcactgt
1561 gcctggctcc caaggcctac gacgtagagc gggagctggg cagccccacg gacgaggaca
1621 gtggccaaga ccagcagctc ctacggggac cccagatccc tgccctggag agcccctgtg
1681 agagtgggtg tggggacatg gatggggacc ccagctgccc gcagctccct cccagagact
1741 ctcccaggtg cctcatgctg gccttgtcac aaagcgaccc aacttttggc aagaagagct
1801 ttgagcagac cttgacagtg gagctctgtg gcacagcagg actcacccca cccaccacac
1861 caccgtacaa gcccacagag gaggatccct tcaaaccaga catcaagcat agtctaggca
1921 aagaaatagc tctcagcctc ccctcccctg agggcctctc actcaaggcc accccagggg
1981 ctgcccacaa gctgccaaag aagcacccag agcgaagtga gctcctgtcc cacttgcgac
2041 atgccacagc ccagccagcc tcccaggctg gccagaagcg tcccttctcc tgttcctttg
2101 gagaccatga ctactgccag gtgctccgac cagaaggcgt cctgcaaagg aaggtgctga
2161 ggtcctggga gccgtctggg gttcaccttg aggactggcc ccagcagggt gccccttggg
2221 ctgaggcaca ggcccctggc agggaggaag acagaagctg tgatgctggc gccccaccca
2281 aggacagcac gctgctgaga gaccatgaga tccgtgccag cctcaccaaa cactttgggc
2341 tgctggagac cgccctggag gaggaagacc tggcctcctg caagagccct gagtatgaca
2401 ctgtctttga agacagcagc agcagcagcg gcgagagcag cttcctccca gaggaggaag
2461 aggaagaagg ggaggaggag gaggaggacg atgaagaaga ggactcaggg gtcagcccca
2521 cttgctctga ccactgcccc taccagagcc caccaagcaa ggccaaccgg cagctctgtt
2581 cccgcagccg ctcaagctct ggctcttcac cctgccactc ctggtcacca gccactcgaa
2641 ggaacttcag atgcgagagc agagggccgt gttcagacag aacgccaagc atccggcacg
2701 ccaggaagcg gcgggaaaag gccattgggg aaggccgcgt ggtgtacatt caaaatctct
2761 ccagcgacat gagctcccga gagctgaaga ggcgctttga agtgtttggt gagattgagg
2821 agtgcgaggt gctgacaaga aataggagag gcgagaagta cggcttcatc acctaccggt
2881 gttctgagca cgcggccctc tctttgacaa agggcgctgc cctgaggaag cgcaacgagc
2941 cctccttcca gctgagctac ggagggctcc ggcacttctg ctggcccaga tacactgact
3001 acgattccaa ttcagaagag gcccttcctg cgtcagggaa aagcaagtat gaagccatgg
3061 attttgacag cttactgaaa gaggcccagc agagcctgca ttgataacag ccttaaccct
3121 cgaggaatac ctcaatacct cagacaaggc ccttccaata tgtttacgtt ttcaaagaaa
3181 tcaagtatat gaggagagcg agcgagcgtg agagaacacc cgtgagagag acttgaaact
3241 gctgtccttt
//