LOCUS AK056510 3842 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ31948 fis, clone NT2RP7007100, highly similar
to Oxysterol-binding protein-related protein 5.
ACCESSION AK056510
VERSION AK056510.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3842)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ninomiya,K., Wagatsuma,M., Kanda,K., Kondo,H., Yokoi,T.,
Kodaira,H., Furuya,T., Takahashi,M., Kikkawa,E., Omura,Y., Abe,K.,
Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..3842
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7007100"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000013124"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 117..2756
/codon_start=1
/note="highly similar to Oxysterol-binding
protein-related protein 5"
/protein_id="BAG51735.1"
/translation="MKEEAFLRRRFSLCPPSSTPQKVDPRKLTRNLLLSGDNELYPLS
PGKDMEPNGPSLPRDEGPPTPSSATKVPPAEYRLCNGSDKECVSPTARVTKKETLKAQ
KENYRQEKKRATRQLLSALTDPSVVIMADSLKIRGTLKSWTKLWCVLKPGVLLIYKTP
KVGQWVGTVLLHCCELIERPSKKDGFCFKLFHPLDQSVWAVKGPKGESVGSITQPLPS
SYLIFRAASESDGRCWLDALELALRCSSLLRLGTCKPGRDGEPGTSPDASPSSLCGLP
ASATVHPDQDLFPLNGSSLENDAFSDKSERENPEESDTETQDHSRKTESGSDQSETPG
APVRRGTTYVEQVQEELGELGEASQVETVSEENKSLMWTLLKQLRPGMDLSRVVLPTF
VLEPRSFLNKLSDYYYHADLLSRAAVEEDAYSRMKLVLRWYLSGFYKKPKGIKKPYNP
ILGETFRCCWFHPQTDSRTFYIAEQVSHHPPVSAFHVSNRKDGFCISGSITAKSRFYG
NSLSALLDGKATLTFLNRAEDYTLTMPYAHCKGILYGTMTLELGGKVTIECAKNNFQA
QLEFKLKPFFGGSTSINQISGKITSGEEVLASLSGHWDRDVFIKEEGSGSSALFWTPS
GEVRRQRLRQHTVPLEEQTELESERLWQHVTRAISKGDQHRATQEKFALEEAQRQRAR
ERQESLMPWKPQLFHLDPITQEWHYRYEDHSPWDPLKDIAQFEQDGILRTLQQEAVAR
QTTFLGSPGPRHERSGPDQRLRKASDQPSGHSQATESSGSTPESCPELSDEEQDGDFV
PGGESPCPRCRKEARRLQALHEAILSIREAQQELHRHLSAMLSSTARAAQAPTPGLLQ
SPRSWFLLCVFLACQLFINHILK"
BASE COUNT 763 a 1232 c 1205 g 642 t
ORIGIN
1 atctgctggc atttcctgca gccaggcccg cgccgccagt ggagcccccg cgcgcccggc
61 cggcccggag caccgagctc gcggcacggt aggagaagcc cccgagcgcc cacagcatga
121 aggaggaggc cttcctccgg cgccgcttct ccctgtgtcc accttcctcc acccctcaga
181 aagtcgaccc ccggaagctc acccggaact tgctcctcag cggagacaat gagctctacc
241 cactcagccc agggaaggac atggagccca acggcccgtc gctgcccagg gatgaagggc
301 ccccgacccc aagctctgcc acgaaggtgc caccggcaga gtacaggctg tgcaacgggt
361 cagacaagga atgtgtgtcc cccaccgcca gggtcaccaa gaaggagact ctcaaggcgc
421 agaaggagaa ctaccggcag gagaagaagc gcgccacacg gcagctgctc agcgctctga
481 cagaccccag cgtggtcatc atggctgaca gcctgaagat ccgcggcacc ctgaagagct
541 ggaccaagct gtggtgcgtg ctgaagccgg gggtgctgct catctacaag acgcccaagg
601 tgggccagtg ggtgggcacg gtgctgctgc actgctgcga gctcatcgag cggccctcca
661 agaaggacgg cttctgcttc aagctcttcc acccgctgga tcagtccgtc tgggccgtga
721 agggccccaa aggtgagagc gtgggctcca tcacacagcc cctgcccagc agctacctga
781 tcttcagggc cgcctccgag tcagatggtc gctgctggct ggacgccctg gagctggccc
841 tgcgctgctc tagcctactg agactgggca cctgcaagcc gggccgagac ggggagccag
901 ggacctcgcc agacgcatca ccctcatcgc tctgtgggct gccagcctca gccactgtcc
961 acccagacca agacctgttc ccactgaacg ggtcttccct ggagaacgat gcattctcag
1021 acaagtcgga gagagagaac cctgaggagt cagataccga gacccaggac catagccgga
1081 agacggagag tggcagcgac cagtcagaga cccctggggc cccggtgcgg agagggacca
1141 cctatgtgga gcaggtccag gaggagctgg gggagctggg cgaggcgtcc caggtggaga
1201 cagtgtcaga ggagaacaag agtctgatgt ggaccctgct gaagcagcta cggccaggca
1261 tggacctgtc ccgcgtggtg ctacccacgt tcgtactgga gccgcgctcc ttcctgaaca
1321 agctctccga ctactactac cacgcagacc tgctctccag ggctgcggtg gaggaggatg
1381 cctacagccg catgaagctg gtgctgcggt ggtacctgtc tggcttctac aagaagccca
1441 agggaatcaa gaagccgtac aaccccatcc tgggggagac cttccgctgc tgctggttcc
1501 acccgcagac tgacagccgc acattctaca tagcagagca ggtgtcccac cacccgcccg
1561 tgtctgcctt ccacgtcagc aaccggaagg acggcttctg catcagtggc agcatcacag
1621 ccaagtccag gttttatggg aactcgctgt cggcgctgct ggacggcaaa gccacgctca
1681 ccttcctgaa ccgagccgag gattacaccc ttaccatgcc ctacgcccac tgcaaaggaa
1741 tcctgtatgg cacgatgacc ctggagctgg gtgggaaggt caccatcgag tgtgcgaaga
1801 acaacttcca ggcccagctg gaattcaaac tcaagccctt cttcgggggt agcaccagca
1861 tcaaccagat ctcgggaaag atcacgtcgg gagaggaagt cctggcgagc ctcagtggcc
1921 actgggacag ggacgtgttt atcaaggagg aagggagcgg aagcagtgcg cttttctgga
1981 ccccgagcgg ggaggtccgc agacagaggc tgaggcagca cacggtgccg ctggaggagc
2041 agacggagct ggagtccgag aggctctggc agcacgtcac cagggccatc agcaagggcg
2101 accagcacag ggccacacag gagaagtttg cactggagga ggcacagcgg cagcgggccc
2161 gtgagcggca ggagagcctc atgccctgga agccgcagct gttccacctg gaccccatca
2221 cccaggagtg gcactaccga tacgaggacc acagcccctg ggaccccctg aaggacatcg
2281 cccagtttga gcaagacggg atcctgcgga ccttgcagca ggaggccgtg gcccgccaga
2341 ccaccttcct gggcagccca gggcccaggc acgagaggtc tggcccagac cagcggcttc
2401 gcaaggccag cgaccagccc tccggccaca gccaggccac ggagagcagc ggatccacgc
2461 ctgagtcctg cccagagctc tcagacgagg agcaggatgg tgactttgtc cctggcggtg
2521 agagcccatg ccctcggtgc aggaaggagg cgcggcggct gcaggccctg cacgaggcca
2581 tcctctccat ccgagaggcc cagcaggagc tgcacaggca cctctcggcc atgctgagct
2641 ccacggcacg ggcagcacag gcaccgaccc caggcctcct gcagagcccc cgatcctggt
2701 tcctgctctg cgtgttcctg gcgtgtcagc tgttcattaa ccacatcctc aaataggagc
2761 cctgggggca gagctcctgg ccagtcccga gccctccctc ccaggcaccc agcactttaa
2821 gcctgctcca tggaggcaga gaggcccggc aagcacagcc actgtgacgg ggagtccagg
2881 cgcaggaggg acccggggcc acaagggcgc tgtgggccca ggtgtgctgg gcccctctca
2941 ggggcactgg cctctctgca gggccttccg cccagcgctg gccttaatgc taaagccaaa
3001 tgcagcttct gctgtgcgac gcactcctgg ccatcttgcc gtgtcacccc ctgtccggcc
3061 tccacttgcc atgggggatg gatggattta gggtgggagg gcctgtgggg gccctggaca
3121 gtcacacccc agcagcagtg agtgggcagg tttggaggag ccccgagtgg cccaggagtc
3181 cccccacaca cagatgcata ggcctgcctt ccggagaccc tgtccacatt gccgggacca
3241 ccctggtggg gccactggtg ggtgccaggg gcaggttagg gccactctgg ggaaggcatt
3301 ttggtttttt attccacgct gtgctgtttg gatgggagcc ccacagaggc aggtcctgga
3361 accaccccac ccccacacct ggacgctcgc tctggtgggg gcacacgcag gtggaggtgg
3421 ttgtgggtgc aggtgtgtgc aggggtgtgg ggggcgcagg ggtgtggctt agctggcccc
3481 gcacccaggc cggggaggct caagttcgcc actttactca gaccgatgca cagtcttccc
3541 attttacact tttttaataa acataattgc aatattttag gtgggctgcg agctgcagtc
3601 agccttcacg tctggcctca gtccccgtgt cagtgccgct ctgcgtgtgc gtgtgcgcgt
3661 gtgtgagcct ctacacatat atatacgtac agagccttaa accacatcgt ggcggtgccg
3721 tctgagctgt agcgggtggc tttgtttcca gtttttgtac ccgtgtcctt gtctcccctc
3781 ctcccccatc tggggatgtg tctgtgttcc acaccttgaa ataaacagac acatacgtgt
3841 tc
//